GRMZM2G123308 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G123308 T272046_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN

NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.909 0.979
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN

NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.909 0.979
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH

DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.875 0.979
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH

DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.875 0.979
KAN4
M00881_2.00
Arabidopsis thaliana
NWNRTBCNN

NNGVAYNWN
PBM
Franco-Zorrilla et al.(2014)
KAN4
0.821 0.936
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G123308_P02 Myb 168 219

Links

Other Myb/SANT family TFs
Other Zea mays TFs

396 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_18558 Aegilops tauschii F775_18558 N 0.000
Traes_6DS_87E97B55C Triticum aestivum Traes_6DS_87E97B55C N 0.000
Traes_6DS_1CC9DD1EC Triticum aestivum Traes_6DS_1CC9DD1EC N 0.000
Traes_6BS_FA68506CF Triticum aestivum Traes_6BS_FA68506CF N 0.000
Traes_6BS_A3531CD43 Triticum aestivum Traes_6BS_A3531CD43 N 0.000
Traes_6BS_945FD8DAC1 Triticum aestivum Traes_6BS_945FD8DAC1 N 0.000
Traes_6BS_938E60C80 Triticum aestivum Traes_6BS_938E60C80 N 0.000
Traes_6BS_7F1846171 Triticum aestivum Traes_6BS_7F1846171 N 0.000
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N 0.000
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N 0.000
Traes_2BS_0D569FC2A Triticum aestivum Traes_2BS_0D569FC2A N 0.000
Traes_1BL_37FA9C770 Triticum aestivum Traes_1BL_37FA9C770 N 0.000
Traes_7DS_6B1F6F5E5 Triticum aestivum Traes_7DS_6B1F6F5E5 N 0.000