CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G143328
(
Zea mays
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GRMZM2G143328
T272073_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB05_ANTMA
M11067_2.00
Antirrhinum majus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.668
0.763
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT
ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.662
0.699
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH
DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.662
0.699
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY
RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.662
0.699
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G143328_P01
Myb
22
69
KGPWTLEEDLILVSYISQHGEGSWDNLARAAGLNRNGKSCRLRWLNYL
GRMZM2G143328_P01
Myb
75
120
RGSITAGEDTVIRELHARWGNKWSKISKHLPGRTDNEIKNYWRTRI
Links
Other
Myb/SANT
family TFs
Other
Zea mays
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb03g029050
Sorghum bicolor
Sb03g029050
I
0.881
BRADI2G44770
Brachypodium distachyon
BRADI2G44770
I
0.848
MLOC_5568
Hordeum vulgare
MLOC_5568
I
0.848
OMERI01G22060
Oryza meridionalis
OMERI01G22060
I
0.847
OGLUM01G27780
Oryza glumaepatula
OGLUM01G27780
I
0.847
OB01G33330
Oryza brachyantha
OB01G33330
I
0.847
OPUNC01G24010
Oryza punctata
OPUNC01G24010
I
0.847
OS01G0637800
Oryza sativa
OS01G0637800
I
0.847
ORUFI01G26910
Oryza rufipogon
ORUFI01G26910
I
0.847
ORGLA01G0193500
Oryza glaberrima
ORGLA01G0193500
I
0.847
ONIVA01G27030
Oryza nivara
ONIVA01G27030
I
0.847
OBART01G24030
Oryza barthii
OBART01G24030
I
0.847
BGIOSGA004072
Oryza indica
BGIOSGA004072
I
0.847
TRAES3BF026200120CFD_g
Triticum aestivum
TRAES3BF026200120CFD_g
I
0.842
Si003965m.g
Setaria italica
Si003965m.g
I
0.819
TRIUR3_25064
Triticum urartu
TRIUR3_25064
I
0.812
LPERR01G20550
Leersia perrieri
LPERR01G20550
I
0.804
F775_02242
Aegilops tauschii
F775_02242
I
0.787
Traes_3DL_429583AEC
Triticum aestivum
Traes_3DL_429583AEC
I
0.787
Pavir.J35999
Panicum virgatum
Pavir.J35999
I
0.769
Si003841m.g
Setaria italica
Si003841m.g
I
0.768
Pavir.J05460
Panicum virgatum
Pavir.J05460
I
0.745
Pavir.Eb01664
Panicum virgatum
Pavir.Eb01664
N
0.740
Pavir.Eb01665
Panicum virgatum
Pavir.Eb01665
N
0.733
Eucgr.J02217
Eucalyptus grandis
Eucgr.J02217
I
0.728
Traes_4DL_14C563681
Triticum aestivum
Traes_4DL_14C563681
N
0.714
F775_32337
Aegilops tauschii
F775_32337
N
0.714
SapurV1A.0571s0200
Salix purpurea
SapurV1A.0571s0200
I
0.703
GRMZM2G160840
Zea mays
GRMZM2G160840
I
0.702
Ca_03536
Cicer arietinum
Ca_03536
I
0.700
MTR_1g086510
Medicago truncatula
MTR_1g086510
I
0.700
POPTR_0001s35200
Populus trichocarpa
POPTR_0001s35200
I
0.699
GSMUA_Achr6G27290_001
Musa acuminata
GSMUA_Achr6G27290_001
I
0.698
Aquca_002_00135
Aquilegia coerulea
Aquca_002_00135
I
0.697
Pavir.Ia04415
Panicum virgatum
Pavir.Ia04415
I
0.697
OS03G0142600
Oryza sativa
OS03G0142600
I
0.697
Pavir.Ib00221
Panicum virgatum
Pavir.Ib00221
I
0.697
Sb01g047450
Sorghum bicolor
Sb01g047450
I
0.697
OB03G13340
Oryza brachyantha
OB03G13340
I
0.697
BGIOSGA011479
Oryza indica
BGIOSGA011479
I
0.697
Si037281m.g
Setaria italica
Si037281m.g
I
0.697
GSMUA_Achr1G27270_001
Musa acuminata
GSMUA_Achr1G27270_001
I
0.697
ORUFI03G03040
Oryza rufipogon
ORUFI03G03040
I
0.697
ORGLA03G0030900
Oryza glaberrima
ORGLA03G0030900
I
0.697
GRMZM2G054111
Zea mays
GRMZM2G054111
I
0.697
mgf000555m
Mimulus guttatus
mgf000555m
I
0.694
Pavir.Ba00256
Panicum virgatum
Pavir.Ba00256
I
0.693
GSMUA_Achr9G07000_001
Musa acuminata
GSMUA_Achr9G07000_001
I
0.692
VIT_14s0066g01090
Vitis vinifera
VIT_14s0066g01090
I
0.688
MLOC_9927
Hordeum vulgare
MLOC_9927
I
0.688
ORUFI12G17730
Oryza rufipogon
ORUFI12G17730
I
0.687
ORGLA12G0140200
Oryza glaberrima
ORGLA12G0140200
I
0.687
BGIOSGA035999
Oryza indica
BGIOSGA035999
I
0.687
Sb08g018370
Sorghum bicolor
Sb08g018370
I
0.687
Pavir.Cb00499
Panicum virgatum
Pavir.Cb00499
I
0.687
GRMZM2G143046
Zea mays
GRMZM2G143046
I
0.687
Si022831m.g
Setaria italica
Si022831m.g
I
0.687
OB12G22880
Oryza brachyantha
OB12G22880
I
0.687
Bra001005
Brassica rapa
Bra001005
I
0.685
GSMUA_Achr5G21090_001
Musa acuminata
GSMUA_Achr5G21090_001
I
0.685
Eucgr.I01782
Eucalyptus grandis
Eucgr.I01782
I
0.684
GLYMA19G14270
Glycine max
GLYMA19G14270
I
0.683
Traes_4BS_F83CB32DD
Triticum aestivum
Traes_4BS_F83CB32DD
I
0.683
F775_17094
Aegilops tauschii
F775_17094
I
0.683
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
0.683
GRMZM2G131442
Zea mays
GRMZM2G131442
I
0.683
ORUFI11G24630
Oryza rufipogon
ORUFI11G24630
I
0.683
OB11G27320
Oryza brachyantha
OB11G27320
I
0.683
Traes_4DS_2A5B4C4C4
Triticum aestivum
Traes_4DS_2A5B4C4C4
I
0.683
JAMYB
Oryza sativa
OS11G0684000
I
0.683
Sb05g026820
Sorghum bicolor
Sb05g026820
I
0.683
PRUPE_ppa011751mg
Prunus persica
PRUPE_ppa011751mg
I
0.682
Gorai.004G146000
Gossypium raimondii
Gorai.004G146000
I
0.682
Gorai.001G263200
Gossypium raimondii
Gorai.001G263200
I
0.682
Lus10022259.g
Linum usitatissimum
Lus10022259.g
I
0.682
GLYMA19G14230
Glycine max
GLYMA19G14230
I
0.682
GLYMA16G07960
Glycine max
GLYMA16G07960
I
0.682
Pm015692
Prunus mume
Pm015692
I
0.682
Gorai.006G030800
Gossypium raimondii
Gorai.006G030800
I
0.682
TCM_016901
Theobroma cacao
TCM_016901
I
0.682
orange1.1g045384m.g
Citrus sinensis
orange1.1g045384m.g
I
0.680
Ciclev10016820m.g
Citrus clementina
Ciclev10016820m.g
I
0.680
Solyc02g067760.2
Solanum lycopersicum
Solyc02g067760.2
I
0.680
ATMYB57
Arabidopsis lyrata
Al_scaffold_0003_59
I
0.680
Cagra.1561s0019
Capsella grandiflora
Cagra.1561s0019
I
0.680
Bostr.1460s0057
Boechera stricta
Bostr.1460s0057
I
0.680
Carubv10016245m.g
Capsella rubella
Carubv10016245m.g
I
0.680
MTR_6g006030
Medicago truncatula
MTR_6g006030
I
0.680
BRADI2G38560
Brachypodium distachyon
BRADI2G38560
I
0.679
Si024431m.g
Setaria italica
Si024431m.g
N
0.679
Si030584m.g
Setaria italica
Si030584m.g
I
0.678
BGIOSGA026430
Oryza indica
BGIOSGA026430
I
0.678
Pavir.Bb03718
Panicum virgatum
Pavir.Bb03718
I
0.678
LPERR07G23760
Leersia perrieri
LPERR07G23760
I
0.678
OBART07G26990
Oryza barthii
OBART07G26990
I
0.678
GSMUA_Achr3G12730_001
Musa acuminata
GSMUA_Achr3G12730_001
I
0.678
GLYMA10G01330
Glycine max
GLYMA10G01330
I
0.678
Pavir.J03771
Panicum virgatum
Pavir.J03771
I
0.678
BRADI4G04627
Brachypodium distachyon
BRADI4G04627
I
0.678
Bo3g055110
Brassica oleracea
Bo3g055110
I
0.678
OGLUM07G26960
Oryza glumaepatula
OGLUM07G26960
I
0.678
ORGLA07G0213800
Oryza glaberrima
ORGLA07G0213800
I
0.678
ORUFI07G27930
Oryza rufipogon
ORUFI07G27930
I
0.678
OS07G0688200
Oryza sativa
OS07G0688200
I
0.678
Si022474m.g
Setaria italica
Si022474m.g
I
0.678
OPUNC07G25360
Oryza punctata
OPUNC07G25360
I
0.678
OMERI07G23590
Oryza meridionalis
OMERI07G23590
I
0.678
ONIVA07G26740
Oryza nivara
ONIVA07G26740
I
0.678
AMTR_s00003p00219710
Amborella trichopoda
AMTR_s00003p00219710
I
0.676
Pavir.Ca00957
Panicum virgatum
Pavir.Ca00957
I
0.675
PGSC0003DMG400000485
Solanum tuberosum
PGSC0003DMG400000485
I
0.675
GLYMA19G00930
Glycine max
GLYMA19G00930
I
0.675
GLYMA05G08690
Glycine max
GLYMA05G08690
I
0.675
Carubv10007254m.g
Capsella rubella
Carubv10007254m.g
I
0.674
Si026574m.g
Setaria italica
Si026574m.g
I
0.674
Thhalv10027930m.g
Eutrema salsugineum
Thhalv10027930m.g
I
0.674
Bostr.7200s0008
Boechera stricta
Bostr.7200s0008
I
0.674
OB07G32480
Oryza brachyantha
OB07G32480
I
0.674
Lus10032129.g
Linum usitatissimum
Lus10032129.g
I
0.673
MDP0000344978
Malus domestica
MDP0000344978
I
0.673
Lus10014557.g
Linum usitatissimum
Lus10014557.g
I
0.673
MTR_7g035075
Medicago truncatula
MTR_7g035075
I
0.673
gene28435-v1.0-hybrid
Fragaria vesca
gene28435-v1.0-hybrid
I
0.673
evm.TU.supercontig_186.7
Carica papaya
evm.TU.supercontig_186.7
I
0.673
GSMUA_AchrUn_randomG08600_001
Musa acuminata
GSMUA_AchrUn_randomG08600_001
I
0.673
SapurV1A.0358s0050
Salix purpurea
SapurV1A.0358s0050
I
0.673
Pavir.Ca00769
Panicum virgatum
Pavir.Ca00769
I
0.673
TRIUR3_09345
Triticum urartu
TRIUR3_09345
I
0.672
F775_02803
Aegilops tauschii
F775_02803
I
0.672
Lus10038062.g
Linum usitatissimum
Lus10038062.g
I
0.672
BRADI1G64687
Brachypodium distachyon
BRADI1G64687
I
0.672
MLOC_65555
Hordeum vulgare
MLOC_65555
I
0.672
Traes_3AS_5E49D47AF
Triticum aestivum
Traes_3AS_5E49D47AF
I
0.672
TRAES3BF034000040CFD_g
Triticum aestivum
TRAES3BF034000040CFD_g
I
0.672
GSMUA_Achr3G08370_001
Musa acuminata
GSMUA_Achr3G08370_001
I
0.671
GSMUA_Achr9G16640_001
Musa acuminata
GSMUA_Achr9G16640_001
I
0.671
Cucsa.339770
Cucumis sativus
Cucsa.339770
I
0.671
BGIOSGA020382
Oryza indica
BGIOSGA020382
I
0.670
Bo5g155050
Brassica oleracea
Bo5g155050
I
0.669
MYB05_ANTMA
Antirrhinum majus
MYB05_ANTMA
D
0.668
Aquca_073_00013
Aquilegia coerulea
Aquca_073_00013
I
0.668
Sb09g002680
Sorghum bicolor
Sb09g002680
I
0.668
TRIUR3_05136
Triticum urartu
TRIUR3_05136
I
0.668
Sb09g002675
Sorghum bicolor
Sb09g002675
I
0.668
Traes_4AS_E4294BADC
Triticum aestivum
Traes_4AS_E4294BADC
I
0.667
BRADI1G64140
Brachypodium distachyon
BRADI1G64140
I
0.667
Traes_4DL_9023F3504
Triticum aestivum
Traes_4DL_9023F3504
I
0.667
MLOC_17928
Hordeum vulgare
MLOC_17928
I
0.667
SapurV1A.0294s0070
Salix purpurea
SapurV1A.0294s0070
I
0.665
cassava39393.m1
Manihot esculenta
cassava39393.m1
I
0.664
cassava33046.m1
Manihot esculenta
cassava33046.m1
I
0.664
GRMZM2G425427
Zea mays
GRMZM2G425427
I
0.664
Traes_2AS_25C93FD291
Triticum aestivum
Traes_2AS_25C93FD291
I
0.662
Traes_2BS_E8D2BD66E
Triticum aestivum
Traes_2BS_E8D2BD66E
I
0.662
Traes_2AS_25C93FD29
Triticum aestivum
Traes_2AS_25C93FD29
I
0.662
Traes_2DS_61B920833
Triticum aestivum
Traes_2DS_61B920833
I
0.662
GSMUA_Achr8G10470_001
Musa acuminata
GSMUA_Achr8G10470_001
I
0.662
MYB57
Arabidopsis thaliana
AT3G01530
D
0.662
ORUFI01G01910
Oryza rufipogon
ORUFI01G01910
I
0.661
OS01G0128000
Oryza sativa
OS01G0128000
I
0.661