GRMZM2G143328 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G143328 T272073_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB05_ANTMA
M11067_2.00
Antirrhinum majus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYB305_Q3
0.668 0.763
MYB57
M01072_2.00
Arabidopsis thaliana
RCCTAAYT

ARTTAGGY
PBM
Sullivan et al.(2014)
pTH9748
0.662 0.699
MYB57
M07059_2.00
Arabidopsis thaliana
YNTACCTAACTHHH

DDDAGTTAGGTANR
Dap-seq
OMalley et al.(2016)
MYB57_col_a
0.662 0.699
MYB57
M07060_2.00
Arabidopsis thaliana
ACCTAAY

RTTAGGT
Dap-seq
OMalley et al.(2016)
MYB57_colamp_a
0.662 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G143328_P01 Myb 22 69
GRMZM2G143328_P01 Myb 75 120

Links

Other Myb/SANT family TFs
Other Zea mays TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_32337 Aegilops tauschii F775_32337 N 0.714
F775_02242 Aegilops tauschii F775_02242 I 0.787
F775_02803 Aegilops tauschii F775_02803 I 0.672
F775_17094 Aegilops tauschii F775_17094 I 0.683
AMTR_s00003p00219710 Amborella trichopoda AMTR_s00003p00219710 I 0.676
MYB05_ANTMA Antirrhinum majus MYB05_ANTMA D 0.668
Aquca_002_00135 Aquilegia coerulea Aquca_002_00135 I 0.697
Aquca_073_00013 Aquilegia coerulea Aquca_073_00013 I 0.668
ATMYB57 Arabidopsis lyrata Al_scaffold_0003_59 I 0.680
MYB57 Arabidopsis thaliana AT3G01530 D 0.662
Bostr.1460s0057 Boechera stricta Bostr.1460s0057 I 0.680
Bostr.7200s0008 Boechera stricta Bostr.7200s0008 I 0.674
BRADI4G04627 Brachypodium distachyon BRADI4G04627 I 0.678
BRADI2G44770 Brachypodium distachyon BRADI2G44770 I 0.848
BRADI2G38560 Brachypodium distachyon BRADI2G38560 I 0.679
BRADI1G64140 Brachypodium distachyon BRADI1G64140 I 0.667
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.672
Bo5g155050 Brassica oleracea Bo5g155050 I 0.669
Bo3g055110 Brassica oleracea Bo3g055110 I 0.678
Bra001005 Brassica rapa Bra001005 I 0.685
Cagra.1561s0019 Capsella grandiflora Cagra.1561s0019 I 0.680
Carubv10016245m.g Capsella rubella Carubv10016245m.g I 0.680
Carubv10007254m.g Capsella rubella Carubv10007254m.g I 0.674
evm.TU.supercontig_186.7 Carica papaya evm.TU.supercontig_186.7 I 0.673
Ca_03536 Cicer arietinum Ca_03536 I 0.700
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I 0.680
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I 0.680
Cucsa.339770 Cucumis sativus Cucsa.339770 I 0.671
Eucgr.J02217 Eucalyptus grandis Eucgr.J02217 I 0.728
Eucgr.I01782 Eucalyptus grandis Eucgr.I01782 I 0.684
Thhalv10027930m.g Eutrema salsugineum Thhalv10027930m.g I 0.674
gene28435-v1.0-hybrid Fragaria vesca gene28435-v1.0-hybrid I 0.673
GLYMA05G08690 Glycine max GLYMA05G08690 I 0.675
GLYMA10G01330 Glycine max GLYMA10G01330 I 0.678
GLYMA16G07960 Glycine max GLYMA16G07960 I 0.682
GLYMA19G00930 Glycine max GLYMA19G00930 I 0.675
GLYMA19G14230 Glycine max GLYMA19G14230 I 0.682
GLYMA19G14270 Glycine max GLYMA19G14270 I 0.683
Gorai.004G146000 Gossypium raimondii Gorai.004G146000 I 0.682
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I 0.682
Gorai.006G030800 Gossypium raimondii Gorai.006G030800 I 0.682
MLOC_9927 Hordeum vulgare MLOC_9927 I 0.688
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.667
MLOC_5568 Hordeum vulgare MLOC_5568 I 0.848
MLOC_65555 Hordeum vulgare MLOC_65555 I 0.672
LPERR07G23760 Leersia perrieri LPERR07G23760 I 0.678
LPERR01G20550 Leersia perrieri LPERR01G20550 I 0.804
Lus10014557.g Linum usitatissimum Lus10014557.g I 0.673
Lus10022259.g Linum usitatissimum Lus10022259.g I 0.682
Lus10038062.g Linum usitatissimum Lus10038062.g I 0.672
Lus10032129.g Linum usitatissimum Lus10032129.g I 0.673
MDP0000344978 Malus domestica MDP0000344978 I 0.673
cassava33046.m1 Manihot esculenta cassava33046.m1 I 0.664
cassava39393.m1 Manihot esculenta cassava39393.m1 I 0.664
MTR_1g086510 Medicago truncatula MTR_1g086510 I 0.700
MTR_6g006030 Medicago truncatula MTR_6g006030 I 0.680
MTR_7g035075 Medicago truncatula MTR_7g035075 I 0.673
mgf000555m Mimulus guttatus mgf000555m I 0.694
GSMUA_Achr5G21090_001 Musa acuminata GSMUA_Achr5G21090_001 I 0.685
GSMUA_Achr6G27290_001 Musa acuminata GSMUA_Achr6G27290_001 I 0.698
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I 0.678
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.662
GSMUA_Achr1G27270_001 Musa acuminata GSMUA_Achr1G27270_001 I 0.697
GSMUA_AchrUn_randomG08600_001 Musa acuminata GSMUA_AchrUn_randomG08600_001 I 0.673
GSMUA_Achr9G16640_001 Musa acuminata GSMUA_Achr9G16640_001 I 0.671
GSMUA_Achr9G07000_001 Musa acuminata GSMUA_Achr9G07000_001 I 0.692
GSMUA_Achr3G08370_001 Musa acuminata GSMUA_Achr3G08370_001 I 0.671
OBART07G26990 Oryza barthii OBART07G26990 I 0.678
OBART01G24030 Oryza barthii OBART01G24030 I 0.847
OB07G32480 Oryza brachyantha OB07G32480 I 0.674
OB01G33330 Oryza brachyantha OB01G33330 I 0.847
OB12G22880 Oryza brachyantha OB12G22880 I 0.687
OB11G27320 Oryza brachyantha OB11G27320 I 0.683
OB03G13340 Oryza brachyantha OB03G13340 I 0.697
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I 0.697
ORGLA07G0213800 Oryza glaberrima ORGLA07G0213800 I 0.678
ORGLA12G0140200 Oryza glaberrima ORGLA12G0140200 I 0.687
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I 0.847
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I 0.847
OGLUM07G26960 Oryza glumaepatula OGLUM07G26960 I 0.678
BGIOSGA004072 Oryza indica BGIOSGA004072 I 0.847
BGIOSGA011479 Oryza indica BGIOSGA011479 I 0.697
BGIOSGA020382 Oryza indica BGIOSGA020382 I 0.670
BGIOSGA026430 Oryza indica BGIOSGA026430 I 0.678
BGIOSGA035999 Oryza indica BGIOSGA035999 I 0.687
OMERI01G22060 Oryza meridionalis OMERI01G22060 I 0.847
OMERI07G23590 Oryza meridionalis OMERI07G23590 I 0.678
ONIVA07G26740 Oryza nivara ONIVA07G26740 I 0.678
ONIVA01G27030 Oryza nivara ONIVA01G27030 I 0.847
OPUNC07G25360 Oryza punctata OPUNC07G25360 I 0.678
OPUNC01G24010 Oryza punctata OPUNC01G24010 I 0.847
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I 0.847
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I 0.697
ORUFI01G01910 Oryza rufipogon ORUFI01G01910 I 0.661
ORUFI07G27930 Oryza rufipogon ORUFI07G27930 I 0.678
ORUFI11G24630 Oryza rufipogon ORUFI11G24630 I 0.683
ORUFI12G17730 Oryza rufipogon ORUFI12G17730 I 0.687
OS03G0142600 Oryza sativa OS03G0142600 I 0.697
OS07G0688200 Oryza sativa OS07G0688200 I 0.678
JAMYB Oryza sativa OS11G0684000 I 0.683
OS01G0128000 Oryza sativa OS01G0128000 I 0.661
OS01G0637800 Oryza sativa OS01G0637800 I 0.847
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.683
Pavir.Ba00256 Panicum virgatum Pavir.Ba00256 I 0.693
Pavir.Bb03718 Panicum virgatum Pavir.Bb03718 I 0.678
Pavir.Ca00769 Panicum virgatum Pavir.Ca00769 I 0.673
Pavir.J35999 Panicum virgatum Pavir.J35999 I 0.769
Pavir.Cb00499 Panicum virgatum Pavir.Cb00499 I 0.687
Pavir.J05460 Panicum virgatum Pavir.J05460 I 0.745
Pavir.J03771 Panicum virgatum Pavir.J03771 I 0.678
Pavir.Eb01664 Panicum virgatum Pavir.Eb01664 N 0.740
Pavir.Eb01665 Panicum virgatum Pavir.Eb01665 N 0.733
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I 0.697
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I 0.697
Pavir.Ca00957 Panicum virgatum Pavir.Ca00957 I 0.675
POPTR_0001s35200 Populus trichocarpa POPTR_0001s35200 I 0.699
Pm015692 Prunus mume Pm015692 I 0.682
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I 0.682
SapurV1A.0571s0200 Salix purpurea SapurV1A.0571s0200 I 0.703
SapurV1A.0358s0050 Salix purpurea SapurV1A.0358s0050 I 0.673
SapurV1A.0294s0070 Salix purpurea SapurV1A.0294s0070 I 0.665
Si024431m.g Setaria italica Si024431m.g N 0.679
Si003841m.g Setaria italica Si003841m.g I 0.768
Si022474m.g Setaria italica Si022474m.g I 0.678
Si022831m.g Setaria italica Si022831m.g I 0.687
Si026574m.g Setaria italica Si026574m.g I 0.674
Si030584m.g Setaria italica Si030584m.g I 0.678
Si037281m.g Setaria italica Si037281m.g I 0.697
Si003965m.g Setaria italica Si003965m.g I 0.819
Solyc02g067760.2 Solanum lycopersicum Solyc02g067760.2 I 0.680
PGSC0003DMG400000485 Solanum tuberosum PGSC0003DMG400000485 I 0.675
Sb09g002680 Sorghum bicolor Sb09g002680 I 0.668
Sb08g018370 Sorghum bicolor Sb08g018370 I 0.687
Sb05g026820 Sorghum bicolor Sb05g026820 I 0.683
Sb03g029050 Sorghum bicolor Sb03g029050 I 0.881
Sb01g047450 Sorghum bicolor Sb01g047450 I 0.697
Sb09g002675 Sorghum bicolor Sb09g002675 I 0.668
TCM_016901 Theobroma cacao TCM_016901 I 0.682
Traes_2AS_25C93FD291 Triticum aestivum Traes_2AS_25C93FD291 I 0.662
Traes_4DL_9023F3504 Triticum aestivum Traes_4DL_9023F3504 I 0.667
Traes_4DL_14C563681 Triticum aestivum Traes_4DL_14C563681 N 0.714
Traes_4BS_F83CB32DD Triticum aestivum Traes_4BS_F83CB32DD I 0.683
TRAES3BF034000040CFD_g Triticum aestivum TRAES3BF034000040CFD_g I 0.672
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I 0.842
Traes_3AS_5E49D47AF Triticum aestivum Traes_3AS_5E49D47AF I 0.672
Traes_2DS_61B920833 Triticum aestivum Traes_2DS_61B920833 I 0.662
Traes_2BS_E8D2BD66E Triticum aestivum Traes_2BS_E8D2BD66E I 0.662
Traes_3DL_429583AEC Triticum aestivum Traes_3DL_429583AEC I 0.787
Traes_2AS_25C93FD29 Triticum aestivum Traes_2AS_25C93FD29 I 0.662
Traes_4AS_E4294BADC Triticum aestivum Traes_4AS_E4294BADC I 0.667
Traes_4DS_2A5B4C4C4 Triticum aestivum Traes_4DS_2A5B4C4C4 I 0.683
TRIUR3_09345 Triticum urartu TRIUR3_09345 I 0.672
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.668
TRIUR3_25064 Triticum urartu TRIUR3_25064 I 0.812
VIT_14s0066g01090 Vitis vinifera VIT_14s0066g01090 I 0.688
GRMZM2G425427 Zea mays GRMZM2G425427 I 0.664
GRMZM2G160840 Zea mays GRMZM2G160840 I 0.702
GRMZM2G131442 Zea mays GRMZM2G131442 I 0.683
GRMZM2G054111 Zea mays GRMZM2G054111 I 0.697
GRMZM2G143046 Zea mays GRMZM2G143046 I 0.687