GRMZM2G147346 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G147346 T272078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH

DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.707 0.774
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN

NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.707 0.774
MYB15
M07084_2.00
Arabidopsis thaliana
NNNHNNHHNHHYCACCWAMYH

DRKTWGGTGRDDNDDNNDNNN
Dap-seq
OMalley et al.(2016)
ATY19_col_a
0.664 0.753
MYB15
M02699_2.00
Arabidopsis thaliana
CCACCTACCSBBG

CVVSGGTAGGTGG
SELEX
Mathelier et al.(2014)
MA0574.1
0.664 0.753
MYB15
M11041_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_01
0.664 0.753
MYB15
M11042_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB15_Q2
0.664 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G147346_P01 Myb 14 61
GRMZM2G147346_P01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Zea mays TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Si040527m.g Setaria italica Si040527m.g I 0.864
Pavir.Ia01684 Panicum virgatum Pavir.Ia01684 I 0.864
Sb01g019270 Sorghum bicolor Sb01g019270 I 0.864
Pavir.J09313 Panicum virgatum Pavir.J09313 I 0.861
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.781
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.767
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.767
OS10G0478300 Oryza sativa OS10G0478300 I 0.767
BRADI3G28830 Brachypodium distachyon BRADI3G28830 I 0.747
TRIUR3_31731 Triticum urartu TRIUR3_31731 I 0.741
F775_20725 Aegilops tauschii F775_20725 I 0.739
GSMUA_Achr5G18600_001 Musa acuminata GSMUA_Achr5G18600_001 I 0.737
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.733
BRADI3G49190 Brachypodium distachyon BRADI3G49190 I 0.724
OMERI10G10120 Oryza meridionalis OMERI10G10120 I 0.720
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I 0.716
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.716
F775_29501 Aegilops tauschii F775_29501 I 0.713
BRADI3G49180 Brachypodium distachyon BRADI3G49180 I 0.713
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I 0.713
MLOC_43806 Hordeum vulgare MLOC_43806 I 0.713
MLOC_34646 Hordeum vulgare MLOC_34646 I 0.713
Traes_6BL_E5A9546C9 Triticum aestivum Traes_6BL_E5A9546C9 I 0.713
Traes_6DL_991931CF9 Triticum aestivum Traes_6DL_991931CF9 I 0.713
Traes_6DL_BBAC725C3 Triticum aestivum Traes_6DL_BBAC725C3 I 0.713
Traes_6AL_E1D3D8DAA1 Triticum aestivum Traes_6AL_E1D3D8DAA1 I 0.713
TRIUR3_12302 Triticum urartu TRIUR3_12302 I 0.713
TCM_007868 Theobroma cacao TCM_007868 I 0.711
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.711
Traes_6AL_54D562BC2 Triticum aestivum Traes_6AL_54D562BC2 I 0.710
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I 0.707
PK08038.1 Cannabis sativa PK08038.1 I 0.707
ATMYB13 Arabidopsis thaliana AT1G06180 D 0.707
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I 0.707
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.705
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.705
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.705
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.705
mgf011672m Mimulus guttatus mgf011672m I 0.704
MDP0000897594 Malus domestica MDP0000897594 I 0.704
MYB14 Arabidopsis thaliana AT2G31180 I 0.702
Bra021708 Brassica rapa Bra021708 I 0.702
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.702
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.702
Bo4g176020 Brassica oleracea Bo4g176020 I 0.702
Bo4g176030 Brassica oleracea Bo4g176030 I 0.702
Bra018267 Brassica rapa Bra018267 I 0.702
Traes_6AL_BB730675A Triticum aestivum Traes_6AL_BB730675A I 0.702
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.702
BRADI3G52260 Brachypodium distachyon BRADI3G52260 I 0.701
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.700
MLOC_71418 Hordeum vulgare MLOC_71418 I 0.699
Traes_6AL_C13753B31 Triticum aestivum Traes_6AL_C13753B31 I 0.699
F775_14744 Aegilops tauschii F775_14744 I 0.699
TRIUR3_14330 Triticum urartu TRIUR3_14330 I 0.699
Traes_6DL_8BAAC240D Triticum aestivum Traes_6DL_8BAAC240D I 0.699
Bo3g025100 Brassica oleracea Bo3g025100 I 0.699
Gorai.008G151100 Gossypium raimondii Gorai.008G151100 I 0.698
Aquca_030_00385 Aquilegia coerulea Aquca_030_00385 I 0.697
MDP0000148689 Malus domestica MDP0000148689 N 0.696
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.695
Bo1g102190 Brassica oleracea Bo1g102190 I 0.694
POPTR_0019s14120 Populus trichocarpa POPTR_0019s14120 I 0.694
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.694
PK03488.1 Cannabis sativa PK03488.1 I 0.694
GRMZM2G127857 Zea mays GRMZM2G127857 I 0.694
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.694
SapurV1A.0417s0150 Salix purpurea SapurV1A.0417s0150 I 0.694
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I 0.694
GLYMA19G43740 Glycine max GLYMA19G43740 I 0.694
Bra023742 Brassica rapa Bra023742 I 0.694
Pm015303 Prunus mume Pm015303 I 0.693
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.693
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.693
Lus10021185.g Linum usitatissimum Lus10021185.g I 0.692
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.692
Gorai.013G088200 Gossypium raimondii Gorai.013G088200 I 0.692
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.691
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I 0.691
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.690
GRMZM5G833253 Zea mays GRMZM5G833253 I 0.690
Si017704m.g Setaria italica Si017704m.g I 0.690
Sb04g031110 Sorghum bicolor Sb04g031110 I 0.690
Eucgr.B02144 Eucalyptus grandis Eucgr.B02144 I 0.690
PRUPE_ppa025095mg Prunus persica PRUPE_ppa025095mg I 0.689
OB02G35920 Oryza brachyantha OB02G35920 I 0.689
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.688
Bra022831 Brassica rapa Bra022831 I 0.688
TCM_020889 Theobroma cacao TCM_020889 I 0.688
MYB30 Oryza sativa OS02G0624300 I 0.687
BGIOSGA006005 Oryza indica BGIOSGA006005 I 0.687
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I 0.687
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I 0.687
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I 0.687
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I 0.686
OGLUM02G29380 Oryza glumaepatula OGLUM02G29380 I 0.686
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.686
MDP0000145050 Malus domestica MDP0000145050 I 0.686
LPERR02G23410 Leersia perrieri LPERR02G23410 I 0.686
OBART02G28790 Oryza barthii OBART02G28790 I 0.686
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.686
OPUNC02G26430 Oryza punctata OPUNC02G26430 I 0.686
F775_18231 Aegilops tauschii F775_18231 I 0.686
Bostr.25219s0339 Boechera stricta Bostr.25219s0339 I 0.686
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.686
OLONG_022853 Oryza longistaminata OLONG_022853 I 0.686
BGIOSGA005798 Oryza indica BGIOSGA005798 I 0.686
OS02G0695200 Oryza sativa OS02G0695200 I 0.686
Pm020596 Prunus mume Pm020596 I 0.686
ONIVA02G31530 Oryza nivara ONIVA02G31530 I 0.686
ORUFI02G30350 Oryza rufipogon ORUFI02G30350 I 0.686
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.686
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.686
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.686
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.686
OMERI02G27850 Oryza meridionalis OMERI02G27850 I 0.686
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.685
Bo5g007320 Brassica oleracea Bo5g007320 I 0.685
Ca_12130 Cicer arietinum Ca_12130 I 0.685
Bra015481 Brassica rapa Bra015481 I 0.685
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.685
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I 0.683
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.683
F775_30010 Aegilops tauschii F775_30010 I 0.683
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.683
gene01997-v1.0-hybrid Fragaria vesca gene01997-v1.0-hybrid I 0.682
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I 0.681
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I 0.681
Cagra.1671s0249 Capsella grandiflora Cagra.1671s0249 I 0.681
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.680
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I 0.680
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.679
Si010384m.g Setaria italica Si010384m.g I 0.679
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I 0.679
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.679
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.679
OBART04G23680 Oryza barthii OBART04G23680 I 0.678
OS04G0594100 Oryza sativa OS04G0594100 I 0.678
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I 0.678
OB04G30570 Oryza brachyantha OB04G30570 I 0.678
BGIOSGA014440 Oryza indica BGIOSGA014440 I 0.678
OB02G31990 Oryza brachyantha OB02G31990 I 0.678
OPUNC04G21230 Oryza punctata OPUNC04G21230 I 0.678
OMERI04G19570 Oryza meridionalis OMERI04G19570 I 0.678
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I 0.678
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I 0.678
ONIVA04G19740 Oryza nivara ONIVA04G19740 I 0.678
MTR_1g076150 Medicago truncatula MTR_1g076150 I 0.676
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.676
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.676
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I 0.675
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I 0.675
Sb06g027180 Sorghum bicolor Sb06g027180 I 0.675
GSMUA_Achr8G14540_001 Musa acuminata GSMUA_Achr8G14540_001 N 0.675
GRMZM2G097636 Zea mays GRMZM2G097636 I 0.675
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I 0.675
GRMZM2G097638 Zea mays GRMZM2G097638 I 0.675
PK20358.1 Cannabis sativa PK20358.1 I 0.674
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.674
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I 0.674
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I 0.674
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.674
GRMZM2G038722 Zea mays GRMZM2G038722 I 0.674
Bo6g077600 Brassica oleracea Bo6g077600 I 0.671
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I 0.671
TCM_004046 Theobroma cacao TCM_004046 I 0.671
chr5.CM0071.410.nd Lotus japonicus chr5.CM0071.410.nd I 0.671
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.671
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.671
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.671
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.671
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.671
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I 0.671
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I 0.670
Pm011057 Prunus mume Pm011057 I 0.669
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I 0.669
Lus10041145.g Linum usitatissimum Lus10041145.g I 0.668
cassava38174.valid.m1 Manihot esculenta cassava38174.valid.m1 I 0.668
TRIUR3_12301 Triticum urartu TRIUR3_12301 I 0.667
Aquca_034_00364 Aquilegia coerulea Aquca_034_00364 I 0.667
GSMUA_Achr5G03520_001 Musa acuminata GSMUA_Achr5G03520_001 I 0.666
GSMUA_Achr2G18090_001 Musa acuminata GSMUA_Achr2G18090_001 I 0.666
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.666
F775_32664 Aegilops tauschii F775_32664 I 0.666
F775_27569 Aegilops tauschii F775_27569 I 0.666
BRADI5G15760 Brachypodium distachyon BRADI5G15760 I 0.666
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.666
Traes_6DL_FCDEB9A8B Triticum aestivum Traes_6DL_FCDEB9A8B I 0.666
AC206901.3_FG005 Zea mays AC206901.3_FG005 I 0.666
Traes_2DL_7183519F8 Triticum aestivum Traes_2DL_7183519F8 I 0.666
Sb04g026480 Sorghum bicolor Sb04g026480 I 0.666
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.665
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I 0.665
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.665
PRUPE_ppa020190mg Prunus persica PRUPE_ppa020190mg I 0.665
TCM_032927 Theobroma cacao TCM_032927 I 0.665
Cucsa.118450 Cucumis sativus Cucsa.118450 I 0.665
Pm009364 Prunus mume Pm009364 I 0.665
Cla013669 Citrullus lanatus Cla013669 I 0.665
Carubv10020691m.g Capsella rubella Carubv10020691m.g I 0.665
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I 0.665
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I 0.665
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.664
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I 0.664
PGSC0003DMG400046667 Solanum tuberosum PGSC0003DMG400046667 N 0.664
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I 0.664
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.664
GLYMA03G41100 Glycine max GLYMA03G41100 I 0.664
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.664
MYB15 Arabidopsis thaliana AT3G23250 D 0.664
cassava3286.m1 Manihot esculenta cassava3286.m1 I 0.663
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I 0.663
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I 0.663
Si018182m.g Setaria italica Si018182m.g I 0.663
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I 0.662
chr1.CM0295.20.nd Lotus japonicus chr1.CM0295.20.nd I 0.662
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.662
Cla006077 Citrullus lanatus Cla006077 I 0.662
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.662
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.662
MDP0000230141 Malus domestica MDP0000230141 I 0.662
MDP0000435315 Malus domestica MDP0000435315 I 0.662
VIT_18s0117g00200 Vitis vinifera VIT_18s0117g00200 I 0.662
Ca_12226 Cicer arietinum Ca_12226 I 0.661
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I 0.661
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I 0.661
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I 0.661
Bra001907 Brassica rapa Bra001907 I 0.661
Bo7g040780 Brassica oleracea Bo7g040780 I 0.661
Bo3g081700 Brassica oleracea Bo3g081700 I 0.661
Bra014929 Brassica rapa Bra014929 I 0.661
Carubv10015750m.g Capsella rubella Carubv10015750m.g I 0.661