CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G149958
(
Zea mays
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GRMZM2G149958
T272080_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SRM1
M02307_2.00
Arabidopsis thaliana
NNHNATCNN
NNGATNDNN
PBM
Weirauch et al.(2014)
pTH7080
0.661
0.728
SRM1
M07121_2.00
Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a
0.661
0.728
SRM1
M07122_2.00
Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR
Dap-seq
OMalley et al.(2016)
At5g08520_col_b
0.661
0.728
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G149958_P01
Myb
124
169
AWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Zea mays
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy