GRMZM2G157306 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G157306 T272085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.821 0.872
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.821 0.872
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.820 0.872
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.811 0.830
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.811 0.830
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.811 0.830
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.810 0.851
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.810 0.851
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.808 0.851
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.808 0.851
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.802 0.809
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.799 0.830
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.791 0.809
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.778 0.766
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.778 0.766
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.778 0.766
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.753 0.809
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH

DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.691 0.638
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD

HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.691 0.638
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.682 0.766
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.682 0.766
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.682 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G157306_P01 Myb 97 144
GRMZM2G157306_P02 Myb 97 144
GRMZM2G157306_P03 Myb 97 144

Links

Other Myb/SANT family TFs
Other Zea mays TFs

588 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT2G42040 Arabidopsis thaliana AT2G42040 D 0.000
PGSC0003DMG400023669 Solanum tuberosum PGSC0003DMG400023669 I 0.000
Pm025936 Prunus mume Pm025936 I 0.000
29613.m000377 Ricinus communis 29613.m000377 I 0.000
29613.m000379 Ricinus communis 29613.m000379 I 0.000
cassava31648.valid.m1 Manihot esculenta cassava31648.valid.m1 I 0.000
cassava36463.valid.m1 Manihot esculenta cassava36463.valid.m1 I 0.000
cassava36464.valid.m1 Manihot esculenta cassava36464.valid.m1 I 0.000
Cucsa.242590 Cucumis sativus Cucsa.242590 I 0.000
mgf007626m Mimulus guttatus mgf007626m I 0.000
Aquca_014_00855 Aquilegia coerulea Aquca_014_00855 I 0.000
Ca_07320 Cicer arietinum Ca_07320 I 0.000
VIT_08s0007g06690 Vitis vinifera VIT_08s0007g06690 I 0.000
POPTR_0006s20770 Populus trichocarpa POPTR_0006s20770 I 0.000
POPTR_0006s20790 Populus trichocarpa POPTR_0006s20790 I 0.000
POPTR_0016s05840 Populus trichocarpa POPTR_0016s05840 I 0.000
POPTR_0016s05850 Populus trichocarpa POPTR_0016s05850 I 0.000
PRUPE_ppa016277mg Prunus persica PRUPE_ppa016277mg I 0.000
Sb10g006810 Sorghum bicolor Sb10g006810 I 0.000
Solyc10g080530.1 Solanum lycopersicum Solyc10g080530.1 I 0.000
TCM_024932 Theobroma cacao TCM_024932 I 0.000
VIT_08s0007g06640 Vitis vinifera VIT_08s0007g06640 I 0.000
Bostr.25993s0574 Boechera stricta Bostr.25993s0574 I 0.000
Cagra.13389s0020 Capsella grandiflora Cagra.13389s0020 I 0.000
Carubv10023878m.g Capsella rubella Carubv10023878m.g I 0.000
Pavir.J25248 Panicum virgatum Pavir.J25248 I 0.000
SapurV1A.0251s0220 Salix purpurea SapurV1A.0251s0220 I 0.000
SapurV1A.0251s0230 Salix purpurea SapurV1A.0251s0230 I 0.000
SapurV1A.0854s0090 Salix purpurea SapurV1A.0854s0090 I 0.000
SapurV1A.0854s0100 Salix purpurea SapurV1A.0854s0100 I 0.000
SapurV1A.3188s0010 Salix purpurea SapurV1A.3188s0010 I 0.000
Thhalv10017052m.g Eutrema salsugineum Thhalv10017052m.g I 0.000
PK26699.1 Cannabis sativa PK26699.1 I 0.000
LjT35F01.80.nd Lotus japonicus LjT35F01.80.nd I 0.000
Pavir.J23833 Panicum virgatum Pavir.J23833 I 0.000
orange1.1g019760m.g Citrus sinensis orange1.1g019760m.g I 0.000
Ciclev10012160m.g Citrus clementina Ciclev10012160m.g I 0.000
Eucgr.A02456 Eucalyptus grandis Eucgr.A02456 I 0.000
evm.TU.supercontig_85.54 Carica papaya evm.TU.supercontig_85.54 I 0.000
gene00456-v1.0-hybrid Fragaria vesca gene00456-v1.0-hybrid I 0.000
Gorai.012G100300 Gossypium raimondii Gorai.012G100300 I 0.000
Lus10004164.g Linum usitatissimum Lus10004164.g I 0.000
Lus10021062.g Linum usitatissimum Lus10021062.g I 0.000
MDP0000121493 Malus domestica MDP0000121493 I 0.000
MDP0000154434 Malus domestica MDP0000154434 I 0.000
PDK_20s1436981g002 Phoenix dactylifera PDK_20s1436981g002 I 0.000
OS06G0207600 Oryza sativa OS06G0207600 I 0.000
AMTR_s00024p00159910 Amborella trichopoda AMTR_s00024p00159910 I 0.000
GLYMA02G28962 Glycine max GLYMA02G28962 I 0.000
GLYMA03G30170 Glycine max GLYMA03G30170 I 0.000
GLYMA09G16841 Glycine max GLYMA09G16841 I 0.000
GLYMA19G33070 Glycine max GLYMA19G33070 I 0.000
GRMZM2G033915 Zea mays GRMZM2G033915 I 0.000
GRMZM2G165991 Zea mays GRMZM2G165991 I 0.000
GSMUA_Achr10G29530_001 Musa acuminata GSMUA_Achr10G29530_001 I 0.000
GSMUA_Achr3G07730_001 Musa acuminata GSMUA_Achr3G07730_001 I 0.000
GSMUA_Achr3G20210_001 Musa acuminata GSMUA_Achr3G20210_001 I 0.000
fgenesh2_kg.4__2350__AT2G42040.1 Arabidopsis lyrata fgenesh2_kg.4__2350__AT2G42040.1 I 0.000
F775_01928 Aegilops tauschii F775_01928 I 0.000
BGIOSGA005516 Oryza indica BGIOSGA005516 I 0.000
BGIOSGA022518 Oryza indica BGIOSGA022518 I 0.000
Bo3g035920 Brassica oleracea Bo3g035920 I 0.000
Bo4g014690 Brassica oleracea Bo4g014690 I 0.000
Bo4g191280 Brassica oleracea Bo4g191280 I 0.000
Bra000251 Brassica rapa Bra000251 I 0.000
Bra004667 Brassica rapa Bra004667 I 0.000
Bra016897 Brassica rapa Bra016897 I 0.000
BRADI1G46270 Brachypodium distachyon BRADI1G46270 I 0.000
GSMUA_Achr7G18600_001 Musa acuminata GSMUA_Achr7G18600_001 I 0.000
GSMUA_Achr9G15730_001 Musa acuminata GSMUA_Achr9G15730_001 I 0.000
OMERI06G07980 Oryza meridionalis OMERI06G07980 I 0.000
ONIVA02G36360 Oryza nivara ONIVA02G36360 I 0.000
ONIVA06G08110 Oryza nivara ONIVA06G08110 I 0.000
OPUNC02G31650 Oryza punctata OPUNC02G31650 I 0.000
OPUNC06G06450 Oryza punctata OPUNC06G06450 I 0.000
ORGLA02G0296600 Oryza glaberrima ORGLA02G0296600 I 0.000
ORGLA06G0063300 Oryza glaberrima ORGLA06G0063300 I 0.000
ORUFI02G35820 Oryza rufipogon ORUFI02G35820 I 0.000
ORUFI06G07050 Oryza rufipogon ORUFI06G07050 I 0.000
OMERI02G32570 Oryza meridionalis OMERI02G32570 I 0.000
OGLUM06G07170 Oryza glumaepatula OGLUM06G07170 I 0.000
OGLUM02G35430 Oryza glumaepatula OGLUM02G35430 I 0.000
LPERR02G28190 Leersia perrieri LPERR02G28190 I 0.000
LPERR06G06210 Leersia perrieri LPERR06G06210 I 0.000
MLOC_17575 Hordeum vulgare MLOC_17575 I 0.000
MTR_1g054175 Medicago truncatula MTR_1g054175 I 0.000
OS02G0773600 Oryza sativa OS02G0773600 I 0.000
MTR_7g093350 Medicago truncatula MTR_7g093350 I 0.000
MTR_7g093360 Medicago truncatula MTR_7g093360 I 0.000
OB06G16230 Oryza brachyantha OB06G16230 I 0.000
OBART06G06800 Oryza barthii OBART06G06800 I 0.000
GRMZM2G134552 Zea mays GRMZM2G134552 N 0.000