GRMZM2G157306 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G157306 T272085_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.821 0.872
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.821 0.872
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.820 0.872
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.811 0.830
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.811 0.830
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.811 0.830
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.810 0.851
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.810 0.851
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.808 0.851
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.808 0.851
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.802 0.809
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.799 0.830
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.791 0.809
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.778 0.766
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.778 0.766
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.778 0.766
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.753 0.809
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH

DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.691 0.638
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD

HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.691 0.638
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.682 0.766
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.682 0.766
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.682 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G157306_P01 Myb 97 144
GRMZM2G157306_P02 Myb 97 144
GRMZM2G157306_P03 Myb 97 144

Links

Other Myb/SANT family TFs
Other Zea mays TFs

588 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
18263_YNL167C Saccharomyces mikatae 18263_YNL167C I 0.000
18716_YNL167C Saccharomyces paradoxus 18716_YNL167C I 0.000
20254_YNL167C Saccharomyces bayanus 20254_YNL167C I 0.000
AACERI_AaceriAFR025C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR025C I 0.000
AGOS_AFR025C Ashbya gossypii AGOS_AFR025C I 0.000
CAGL0J06182g Candida glabrata CAGL0J06182g I 0.000
Ecym_6410 Eremothecium cymbalariae Ecym_6410 I 0.000
KAFR_0A07440 Kazachstania africana KAFR_0A07440 I 0.000
KLLA0_D08030g Kluyveromyces lactis KLLA0_D08030g I 0.000
KLTH0B06732g Lachancea thermotolerans KLTH0B06732g I 0.000
KLTH0B06732g Kluyveromyces thermotolerans KLTH0B06732g I 0.000
LALA0_S12e03994g Lachancea lanzarotensis LALA0_S12e03994g I 0.000
NCAS_0G02000 Naumovozyma castellii NCAS_0G02000 I 0.000
NDAI_0F03270 Naumovozyma dairenensis NDAI_0F03270 I 0.000
SAKL0E12562g Lachancea kluyveri SAKL0E12562g I 0.000
Scas_Contig654.5 Saccharomyces castellii Scas_Contig654.5 I 0.000
SKO1 Saccharomyces cerevisiae YNL167C D 0.000
SKUD_195304 Saccharomyces kudriavzevii SKUD_195304 I 0.000
SU7_2921 Saccharomyces arboricola SU7_2921 I 0.000
TBLA_0D00190 Tetrapisispora blattae TBLA_0D00190 I 0.000
TDEL_0F00740 Torulaspora delbrueckii TDEL_0F00740 I 0.000
ZBAI_00974 Zygosaccharomyces bailii ZBAI_00974 I 0.000
ZBAI_06263 Zygosaccharomyces bailii ZBAI_06263 I 0.000