GRMZM2G181030 (Zea mays)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GRMZM2G181030 T272124_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.738 0.761
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.724 0.739
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.724 0.739
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.724 0.739
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.724 0.739
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.724 0.739
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.716 0.783
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.707 0.804
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.707 0.804
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.701 0.783
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.701 0.783
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.701 0.783
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.671 0.739
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.671 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G181030_P01 Myb 58 103

Links

Other Myb/SANT family TFs
Other Zea mays TFs

254 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Gb00859 Panicum virgatum Pavir.Gb00859 I 0.881
Pavir.J10427 Panicum virgatum Pavir.J10427 I 0.881
Si010077m.g Setaria italica Si010077m.g I 0.881
Sb06g026500 Sorghum bicolor Sb06g026500 I 0.881
ORUFI04G24740 Oryza rufipogon ORUFI04G24740 I 0.810
OGLUM04G22920 Oryza glumaepatula OGLUM04G22920 I 0.810
OLONG_010266 Oryza longistaminata OLONG_010266 I 0.810
OMERI04G19240 Oryza meridionalis OMERI04G19240 I 0.810
ONIVA04G22180 Oryza nivara ONIVA04G22180 I 0.810
OPUNC04G20560 Oryza punctata OPUNC04G20560 I 0.810
LPERR04G18770 Leersia perrieri LPERR04G18770 I 0.810
OB04G29880 Oryza brachyantha OB04G29880 I 0.810
OS04G0583900 Oryza sativa OS04G0583900 I 0.810
OBART04G23030 Oryza barthii OBART04G23030 I 0.810
BGIOSGA014483 Oryza indica BGIOSGA014483 I 0.810
MLOC_62877 Hordeum vulgare MLOC_62877 I 0.806
ORGLA02G0242600 Oryza glaberrima ORGLA02G0242600 I 0.794
OS02G0685200 Oryza sativa OS02G0685200 I 0.794
ORUFI02G29720 Oryza rufipogon ORUFI02G29720 I 0.794
OMERI02G27330 Oryza meridionalis OMERI02G27330 I 0.794
BGIOSGA005828 Oryza indica BGIOSGA005828 I 0.794
OBART02G28240 Oryza barthii OBART02G28240 I 0.794
ONIVA09G03730 Oryza nivara ONIVA09G03730 I 0.794
OGLUM02G28780 Oryza glumaepatula OGLUM02G28780 I 0.794
OLONG_003280 Oryza longistaminata OLONG_003280 I 0.794
BRADI5G19380 Brachypodium distachyon BRADI5G19380 I 0.788
Traes_2AL_660616C44 Triticum aestivum Traes_2AL_660616C44 I 0.788
F775_27077 Aegilops tauschii F775_27077 I 0.788
Traes_2DL_31EED5C94 Triticum aestivum Traes_2DL_31EED5C94 I 0.788
Traes_2BL_3041037F1 Triticum aestivum Traes_2BL_3041037F1 I 0.788
GSMUA_Achr8G13440_001 Musa acuminata GSMUA_Achr8G13440_001 I 0.780
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.779
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.779
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I 0.761
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.761
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.761
Si017289m.g Setaria italica Si017289m.g I 0.761
F775_18043 Aegilops tauschii F775_18043 I 0.761
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.761
Lus10042292.g Linum usitatissimum Lus10042292.g I 0.755
Lus10026365.g Linum usitatissimum Lus10026365.g I 0.755
Bra039503 Brassica rapa Bra039503 I 0.754
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I 0.754
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I 0.754
Carubv10005376m.g Capsella rubella Carubv10005376m.g I 0.754
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I 0.754
RVE2 Arabidopsis thaliana AT5G37260 I 0.754
Bo6g057640 Brassica oleracea Bo6g057640 I 0.754
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I 0.754
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I 0.751
Bo9g161410 Brassica oleracea Bo9g161410 I 0.749
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I 0.748
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I 0.748
OS06G0728700 Oryza sativa OS06G0728700 I 0.746
OBART06G28140 Oryza barthii OBART06G28140 I 0.746
OB06G35920 Oryza brachyantha OB06G35920 I 0.746
Si006457m.g Setaria italica Si006457m.g I 0.746
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I 0.746
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I 0.746
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I 0.746
TRIUR3_01040 Triticum urartu TRIUR3_01040 I 0.746
OPUNC06G25680 Oryza punctata OPUNC06G25680 I 0.746
ONIVA06G31120 Oryza nivara ONIVA06G31120 I 0.746
OMERI06G28070 Oryza meridionalis OMERI06G28070 I 0.746
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I 0.746
OLONG_007470 Oryza longistaminata OLONG_007470 I 0.746
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I 0.746
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I 0.746
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I 0.746
Sb10g030960 Sorghum bicolor Sb10g030960 I 0.746
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.746
GRMZM2G145041 Zea mays GRMZM2G145041 I 0.746
LPERR06G23620 Leersia perrieri LPERR06G23620 I 0.746
F775_23690 Aegilops tauschii F775_23690 I 0.746
BGIOSGA020501 Oryza indica BGIOSGA020501 I 0.746
Cla018914 Citrullus lanatus Cla018914 I 0.745
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.745
TCM_013400 Theobroma cacao TCM_013400 I 0.745
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I 0.745
PK28456.1 Cannabis sativa PK28456.1 I 0.745
MDP0000795432 Malus domestica MDP0000795432 I 0.745
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.745
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I 0.745
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I 0.745
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.745
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.745
Pm025253 Prunus mume Pm025253 I 0.745
OB02G35470 Oryza brachyantha OB02G35470 I 0.745
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.745
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.743
gw1.6.1363.1 Ostreococcus RCC809 gw1.6.1363.1 I 0.743
Bo5g025310 Brassica oleracea Bo5g025310 I 0.739
Bra025914 Brassica rapa Bra025914 I 0.739
PK08316.1 Cannabis sativa PK08316.1 D 0.738
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.738
GLYMA09G29800 Glycine max GLYMA09G29800 I 0.736
GLYMA16G34340 Glycine max GLYMA16G34340 I 0.734
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I 0.733
cassava33517.m1 Manihot esculenta cassava33517.m1 I 0.730
30171.m000418 Ricinus communis 30171.m000418 I 0.730
PRUPE_ppa005083mg Prunus persica PRUPE_ppa005083mg I 0.730
RVE1 Vitis vinifera VIT_04s0079g00410 I 0.730
Solyc02g036370.2 Solanum lycopersicum Solyc02g036370.2 I 0.730
cassava35529.valid.m1 Manihot esculenta cassava35529.valid.m1 I 0.730
mgf011909m Mimulus guttatus mgf011909m I 0.730
MDP0000581293 Malus domestica MDP0000581293 I 0.730
orange1.1g012625m.g Citrus sinensis orange1.1g012625m.g I 0.730
AMTR_s00044p00072910 Amborella trichopoda AMTR_s00044p00072910 I 0.730
MDP0000187927 Malus domestica MDP0000187927 I 0.730
Eucgr.F02906 Eucalyptus grandis Eucgr.F02906 I 0.730
POPTR_0004s07270 Populus trichocarpa POPTR_0004s07270 I 0.730
Aquca_002_01329 Aquilegia coerulea Aquca_002_01329 I 0.730
Ciclev10011554m.g Citrus clementina Ciclev10011554m.g I 0.730
cassava35531.valid.m1 Manihot esculenta cassava35531.valid.m1 I 0.730
cassava35530.valid.m1 Manihot esculenta cassava35530.valid.m1 I 0.730
PGSC0003DMG400021459 Solanum tuberosum PGSC0003DMG400021459 I 0.730
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.730
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.729
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I 0.729
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.728
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.728
MTR_5g076960 Medicago truncatula MTR_5g076960 I 0.726
RVE7L Arabidopsis thaliana AT3G10113 D 0.724
SapurV1A.0985s0170 Salix purpurea SapurV1A.0985s0170 I 0.724
RVE7 Arabidopsis thaliana AT1G18330 D 0.724
SapurV1A.0147s0490 Salix purpurea SapurV1A.0147s0490 I 0.724
fgenesh2_kg.1__2004__AT1G18330.2 Arabidopsis lyrata fgenesh2_kg.1__2004__AT1G18330.2 I 0.724
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.722
Lus10031893.g Linum usitatissimum Lus10031893.g I 0.721
MDP0000193097 Malus domestica MDP0000193097 I 0.721
Lus10031322.g Linum usitatissimum Lus10031322.g I 0.721
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I 0.720
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.720
mgf001364m Mimulus guttatus mgf001364m I 0.720
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I 0.720
POPTR_0017s01380 Populus trichocarpa POPTR_0017s01380 I 0.720
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I 0.720
29677.m000183 Ricinus communis 29677.m000183 I 0.717
OSTLU_5960 Ostreococcus lucimarinus OSTLU_5960 I 0.717
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.716
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.716
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.716
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.716
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.716
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.716
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.716
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.716
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.716
OS08G0157600 Oryza sativa OS08G0157600 D 0.716
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.716
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.716
Si014685m.g Setaria italica Si014685m.g I 0.716
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.716
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.716
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.716
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.716
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.716
OB08G13700 Oryza brachyantha OB08G13700 I 0.716
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.716
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.716
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.716
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.716
F775_26024 Aegilops tauschii F775_26024 I 0.716
mgf021826m Mimulus guttatus mgf021826m I 0.714
SapurV1A.0202s0430 Salix purpurea SapurV1A.0202s0430 I 0.714
POPTR_0012s03530 Populus trichocarpa POPTR_0012s03530 I 0.714
Carubv10009624m.g Capsella rubella Carubv10009624m.g I 0.714
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I 0.714
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I 0.714
Bo3g001090 Brassica oleracea Bo3g001090 I 0.713
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I 0.713
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I 0.713
MLOC_57684 Hordeum vulgare MLOC_57684 I 0.712
Pavir.J00602 Panicum virgatum Pavir.J00602 I 0.712
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.711
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.711
Cucsa.278220 Cucumis sativus Cucsa.278220 I 0.708
Cla009284 Citrullus lanatus Cla009284 I 0.708
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I 0.707
GLYMA19G45030 Glycine max GLYMA19G45030 I 0.707
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I 0.707
GLYMA16G01980 Glycine max GLYMA16G01980 I 0.707
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.707
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I 0.707
Bo5g002760 Brassica oleracea Bo5g002760 I 0.707
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.707
30076.m004464 Ricinus communis 30076.m004464 I 0.707
TCM_005021 Theobroma cacao TCM_005021 I 0.707
Bra033291 Brassica rapa Bra033291 I 0.707
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I 0.707
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I 0.707
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I 0.707
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I 0.707
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I 0.707
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I 0.707
PK20866.1 Cannabis sativa PK20866.1 I 0.707
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I 0.707
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I 0.707
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I 0.707
GLYMA07G05410 Glycine max GLYMA07G05410 I 0.707
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I 0.707
Cucsa.349800 Cucumis sativus Cucsa.349800 I 0.707
MTR_7g118330 Medicago truncatula MTR_7g118330 I 0.707
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.707
GLYMA03G42260 Glycine max GLYMA03G42260 I 0.707
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I 0.707
LHY Arabidopsis thaliana AT1G01060 D 0.707
Pm028731 Prunus mume Pm028731 I 0.707
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I 0.707
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I 0.704
mgf014004m Mimulus guttatus mgf014004m I 0.704
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I 0.704
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I 0.704
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I 0.704
Pm012998 Prunus mume Pm012998 I 0.702
Bostr.2618s0066 Boechera stricta Bostr.2618s0066 I 0.701
RVE1 Arabidopsis thaliana AT5G17300 D 0.701
RVE1 Arabidopsis lyrata fgenesh2_kg.6__1729__AT5G17300.1 I 0.701
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.701
Bra030496 Brassica rapa Bra030496 I 0.699
SELMODRAFT_78481 Selaginella moellendorffii SELMODRAFT_78481 I 0.699
GLYMA11G33180 Glycine max GLYMA11G33180 I 0.695
GLYMA18G05050 Glycine max GLYMA18G05050 I 0.695
GLYMA14G39130 Glycine max GLYMA14G39130 I 0.695
Ca_18030 Cicer arietinum Ca_18030 I 0.695
GLYMA02G40800 Glycine max GLYMA02G40800 I 0.695
Ca_14385 Cicer arietinum Ca_14385 I 0.695
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.693
Bo3g012470 Brassica oleracea Bo3g012470 I 0.691
Bra023610 Brassica rapa Bra023610 I 0.689
Thhalv10013821m.g Eutrema salsugineum Thhalv10013821m.g I 0.689
Bo2g013560 Brassica oleracea Bo2g013560 I 0.689
Carubv10001147m.g Capsella rubella Carubv10001147m.g I 0.689
evm.TU.supercontig_178.22 Carica papaya evm.TU.supercontig_178.22 I 0.689
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I 0.689
Cagra.4849s0004 Capsella grandiflora Cagra.4849s0004 I 0.689
LjSGA_026437.1 Lotus japonicus LjSGA_026437.1 I 0.686
Bra008563 Brassica rapa Bra008563 I 0.680
Bra006394 Brassica rapa Bra006394 I 0.678
Bra004503 Brassica rapa Bra004503 I 0.677
Bo4g006930 Brassica oleracea Bo4g006930 I 0.677
Pm028732 Prunus mume Pm028732 I 0.672
PRUPE_ppa004107mg Prunus persica PRUPE_ppa004107mg I 0.672
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.672
Lus10010100.g Linum usitatissimum Lus10010100.g I 0.672
MTR_6g477860 Medicago truncatula MTR_6g477860 I 0.672
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.672
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.671
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.671
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.671
CCA1 Arabidopsis thaliana AT2G46830 D 0.671
gw1.1.364.1 Volvox carteri gw1.1.364.1 I 0.667
MTR_3g064500 Medicago truncatula MTR_3g064500 I 0.666
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I 0.664