GSMUA_Achr10G17610_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G17610_001 T272248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.674 0.742
GRMZM2G005066
M11056_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.664 0.699
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.663 0.710
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.661 0.710
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P17610_001 Myb 14 61
GSMUA_Achr10P17610_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA018023 Oryza indica BGIOSGA018023 N 0.000
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.000
F775_32837 Aegilops tauschii F775_32837 N 0.000
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.000
LPERR05G13650 Leersia perrieri LPERR05G13650 N 0.000
OB05G25040 Oryza brachyantha OB05G25040 N 0.000
OGLUM05G18240 Oryza glumaepatula OGLUM05G18240 N 0.000
OMERI05G14890 Oryza meridionalis OMERI05G14890 N 0.000
ONIVA05G17930 Oryza nivara ONIVA05G17930 N 0.000
OPUNC05G15090 Oryza punctata OPUNC05G15090 N 0.000
ORGLA05G0148600 Oryza glaberrima ORGLA05G0148600 N 0.000
ORUFI05G18410 Oryza rufipogon ORUFI05G18410 N 0.000
OS05G0426200 Oryza sativa OS05G0426200 N 0.000
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.000
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.000
Pavir.J18990 Panicum virgatum Pavir.J18990 N 0.000
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.000
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.000
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.000
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.000
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.000