GSMUA_Achr10G17610_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G17610_001 T272248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.674 0.742
GRMZM2G005066
M11056_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.664 0.699
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.663 0.710
MYB49
M07140_2.00
Arabidopsis thaliana
HDBBYYACCWAMYWH

DWRKTWGGTRRVVHD
Dap-seq
OMalley et al.(2016)
MYB49_col_a
0.661 0.710
MYB49
M07141_2.00
Arabidopsis thaliana
NYYYACCTAMYWHN

NDWRKTAGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB49_colamp_a
0.661 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P17610_001 Myb 14 61
GSMUA_Achr10P17610_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ZFP41 Homo sapiens ENSG00000181638 D 0.000
ENSCAFG00000029869 Canis familiaris ENSCAFG00000029869 I 0.000
ENSTTRG00000002889 Tursiops truncatus ENSTTRG00000002889 I 0.000
ENSTSYG00000005406 Tarsius syrichta ENSTSYG00000005406 I 0.000
ENSTBEG00000012843 Tupaia belangeri ENSTBEG00000012843 I 0.000
ENSSTOG00000022550 Ictidomys tridecemlineatus ENSSTOG00000022550 I 0.000
Zfp41 Rattus norvegicus ENSRNOG00000007489 I 0.000
ZFP41 Pan troglodytes ENSPTRG00000040000 I 0.000
Zfp41 Mus musculus ENSMUSG00000047003 I 0.000
AC138696.1 Homo sapiens ENSG00000264668 I 0.000
ENSCSAG00000018633 Chlorocebus sabaeus ENSCSAG00000018633 I 0.000
ENSCJAG00000038069 Callithrix jacchus ENSCJAG00000038069 I 0.000
Myotis_brandtii_ZFP41_10003885 Myotis brandtii Myotis_brandtii_ZFP41_10003885 I 0.000