GSMUA_Achr10G29970_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G29970_001 T272269_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.828 0.925
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.743 0.871
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH

DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.666 0.731
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH

DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.666 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P29970_001 Myb 14 61
GSMUA_Achr10P29970_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

246 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action