GSMUA_Achr1G01650_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr1G01650_001 T272306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.889 0.915
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD

HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.879 0.894
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN

NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.879 0.894
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN

NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.868 0.894
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN

NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.868 0.872
PK00738.1
M02346_2.00
Cannabis sativa
NYWATCYDNN

NNHRGATWRN
PBM
Weirauch et al.(2014)
pTH9487
0.830 0.894
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN

NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.828 0.894
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW

WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.828 0.894
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW

WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.828 0.894
AT1G19000
M02287_2.00
Arabidopsis thaliana
NYTATCYDNN

NNHRGATARN
PBM
Weirauch et al.(2014)
pTH7120
0.817 0.809
AT1G19000
M07012_2.00
Arabidopsis thaliana
HDYHTTATCCAHWW

WWDTGGATAADRHD
Dap-seq
OMalley et al.(2016)
At1g19000_col_a
0.817 0.809
AT1G19000
M07013_2.00
Arabidopsis thaliana
WDYNTTATCCAHWW

WWDTGGATAANRHW
Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a
0.817 0.809
AT5G61620
M07149_2.00
Arabidopsis thaliana
WWHHTTATCCAHWWN

NWWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
AT5G61620_col_a
0.783 0.766
AT5G61620
M07150_2.00
Arabidopsis thaliana
YHTTATCCAHW

WDTGGATAADR
Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a
0.783 0.766
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN

NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.770 0.809
AT5G56840
M07144_2.00
Arabidopsis thaliana
WWYMTTATCCAWWWN

NWWWTGGATAAKRWW
Dap-seq
OMalley et al.(2016)
AT5G56840_col_a
0.762 0.809
AT5G56840
M07145_2.00
Arabidopsis thaliana
HHHWWYHTTATCCWHW

WDWGGATAADRWWDDD
Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a
0.762 0.809
AT3G10580
M07072_2.00
Arabidopsis thaliana
AWBCTTATCYWHWHH

DDWDWRGATAAGVWT
Dap-seq
OMalley et al.(2016)
AT3G10580_col_a
0.753 0.723
AT3G10580
M07073_2.00
Arabidopsis thaliana
CCGAWAAWNTCGGDD

HHCCGANWTTWTCGG
Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a
0.753 0.723
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN

NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.748 0.809
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW

WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.748 0.809
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW

WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.748 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P01650_001 Myb 87 134

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

592 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000016495 Ailuropoda melanoleuca ENSAMEG00000016495 N 0.000
SP100 Macaca mulatta ENSMMUG00000016575 N 0.000
ENSMPUG00000004415 Mustela putorius furo ENSMPUG00000004415 N 0.000
ENSOARG00000020646 Ovis aries ENSOARG00000020646 N 0.000
ENSPCAG00000005793 Procavia capensis ENSPCAG00000005793 N 0.000
ENSPPYG00000013253 Pongo abelii ENSPPYG00000013253 N 0.000
SP140 Pan troglodytes ENSPTRG00000013010 N 0.000
SP140L Pan troglodytes ENSPTRG00000013011 N 0.000
SP100 Pteropus vampyrus ENSPVAG00000003179 N 0.000
ENSSTOG00000005247 Ictidomys tridecemlineatus ENSSTOG00000005247 N 0.000
ENSTBEG00000011553 Tupaia belangeri ENSTBEG00000011553 N 0.000
SP140 Tursiops truncatus ENSTTRG00000009293 N 0.000
ENSVPAG00000011666 Vicugna pacos ENSVPAG00000011666 N 0.000
ENSMMUP00000015997 Macaca fascicularis ENSMMUP00000015997 N 0.000
SP140 Macaca mulatta ENSMMUG00000012199 N 0.000
ENSMICG00000015716 Microcebus murinus ENSMICG00000015716 N 0.000
ENSCAFG00000010704 Canis familiaris ENSCAFG00000010704 N 0.000
SP140 Callithrix jacchus ENSCJAG00000013289 N 0.000
SP140L Callithrix jacchus ENSCJAG00000035676 N 0.000
ENSCSAG00000006889 Chlorocebus sabaeus ENSCSAG00000006889 N 0.000
ENSCSAG00000006962 Chlorocebus sabaeus ENSCSAG00000006962 N 0.000
ENSECAG00000022252 Equus caballus ENSECAG00000022252 N 0.000
ENSETEG00000017626 Echinops telfairi ENSETEG00000017626 N 0.000
ENSFCAG00000002520 Felis catus ENSFCAG00000002520 N 0.000
SP140 Homo sapiens ENSG00000079263 N 0.000
SP140L Homo sapiens ENSG00000185404 N 0.000
SP140L Gorilla gorilla ENSGGOG00000002900 N 0.000
SP140 Gorilla gorilla ENSGGOG00000006936 N 0.000
ENSLAFG00000002303 Loxodonta africana ENSLAFG00000002303 N 0.000
ENSP00000375899-D1 Bos grunniens ENSP00000375899-D1 N 0.000