GSMUA_Achr1G22380_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr1G22380_001 T272334_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH

DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.784 0.871
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY

RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.733 0.882
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.675 0.710
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.675 0.710
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.671 0.699
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P22380_001 Myb 14 61
GSMUA_Achr1P22380_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28677.m000055 Ricinus communis 28677.m000055 N 0.000
29692.m000540 Ricinus communis 29692.m000540 N 0.000
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.000
GAI Arabidopsis thaliana AT1G14920 N 0.000
RGL1 Arabidopsis thaliana AT1G66350 N 0.000
Bo2g052880 Brassica oleracea Bo2g052880 N 0.000
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.000
Bra039762 Brassica rapa Bra039762 N 0.000
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.000
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.000
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.000
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.000
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.000
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.000
Ca_05046 Cicer arietinum Ca_05046 N 0.000
Ca_13295 Cicer arietinum Ca_13295 I 0.000
Cla020062 Citrullus lanatus Cla020062 N 0.000
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.000
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.000
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.000
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.000
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.000
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.000
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.000
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.000
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.000
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.000
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.000
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.000
MDP0000237978 Malus domestica MDP0000237978 N 0.000
MDP0000669451 Malus domestica MDP0000669451 I 0.000
mgf008289m Mimulus guttatus mgf008289m N 0.000
mgf025444m Mimulus guttatus mgf025444m N 0.000
mgf025772m Mimulus guttatus mgf025772m N 0.000
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.000
OB03G38380 Oryza brachyantha OB03G38380 N 0.000
SLR1 Oryza sativa OS03G0707600 N 0.000
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.000
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.000
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.000
Pm014329 Prunus mume Pm014329 I 0.000
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.000
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.000
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.000
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.000
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.000
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.000
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.000
Si039400m.g Setaria italica Si039400m.g N 0.000
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.000
TCM_010965 Theobroma cacao TCM_010965 N 0.000
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.000
Thhalv10018436m.g Eutrema salsugineum Thhalv10018436m.g N 0.000
TRIUR3_18790 Triticum urartu TRIUR3_18790 N 0.000
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.000
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.000