GSMUA_Achr1G26520_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr1G26520_001 T272343_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.868 0.946
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.868 0.946
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.817 0.903
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.674 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P26520_001 Myb 14 61
GSMUA_Achr1P26520_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

566 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA025749 Oryza indica BGIOSGA025749 N 0.000
BRADI1G26960 Brachypodium distachyon BRADI1G26960 N 0.000
GRMZM2G104268 Zea mays GRMZM2G104268 N 0.000
MLOC_56322 Hordeum vulgare MLOC_56322 N 0.000
OB07G21030 Oryza brachyantha OB07G21030 N 0.000
OLONG_010535 Oryza longistaminata OLONG_010535 N 0.000
ORGLA07G0123700 Oryza glaberrima ORGLA07G0123700 N 0.000
Pavir.Ba00916 Panicum virgatum Pavir.Ba00916 N 0.000
Pavir.J19858 Panicum virgatum Pavir.J19858 N 0.000
Sb06g031160 Sorghum bicolor Sb06g031160 N 0.000
Si028955m.g Setaria italica Si028955m.g N 0.000
Traes_7AL_635989DBF Triticum aestivum Traes_7AL_635989DBF N 0.000
Traes_7DL_9D97AB442 Triticum aestivum Traes_7DL_9D97AB442 N 0.000
TRIUR3_11036 Triticum urartu TRIUR3_11036 N 0.000