GSMUA_Achr3G06470_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr3G06470_001 T272379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY

RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.855 0.903
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH

DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.855 0.903
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH

DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.765 0.871
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY

RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.765 0.871
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH

DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.759 0.828
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH

DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.759 0.828
MYB106
M11040_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.737 0.763
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.705 0.731
PK28187.1
M01286_2.00
Cannabis sativa
TACCTACC

GGTAGGTA
PBM
Lambert et al.(2019)
pTH11305
0.682 0.817
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.682 0.677
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.682 0.677
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.682 0.677
ATY53
M07078_2.00
Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN

NNNNNNNNDDHGKTWGGTRVR
Dap-seq
OMalley et al.(2016)
MYB67_col_a
0.664 0.677
AtMYB41
M07109_2.00
Arabidopsis thaliana
DHDBBYYACCTAMYW

WRKTAGGTRRVVHDH
Dap-seq
OMalley et al.(2016)
MYB41_col_a
0.662 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P06470_001 Myb 14 61
GSMUA_Achr3P06470_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

738 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Hand1 Mus musculus ENSMUSG00000037335 D 0.000
Myotis_brandtii_HAND1_10034795 Myotis brandtii Myotis_brandtii_HAND1_10034795 I 0.000
HAND1 Pan troglodytes ENSPTRG00000017446 I 0.000
ENSPPYG00000015975 Pongo abelii ENSPPYG00000015975 I 0.000
ENSPFOG00000012614 Poecilia formosa ENSPFOG00000012614 I 0.000
HAND1 Procavia capensis ENSPCAG00000006706 I 0.000
ENSPANG00000013720 Papio anubis ENSPANG00000013720 I 0.000
HAND1 Oryzias latipes ENSORLG00000015508 I 0.000
HAND1 Ochotona princeps ENSOPRG00000014560 I 0.000
ENSONIG00000013234 Oreochromis niloticus ENSONIG00000013234 I 0.000
HAND1 Otolemur garnettii ENSOGAG00000024691 I 0.000
HAND1 Oryctolagus cuniculus ENSOCUG00000011099 I 0.000
HAND1 Pteropus vampyrus ENSPVAG00000002261 I 0.000
Hand1 Rattus norvegicus ENSRNOG00000002582 I 0.000
ENSSHAG00000009358 Sarcophilus harrisii ENSSHAG00000009358 I 0.000
ENSP00000231121 Macaca fascicularis ENSP00000231121 I 0.000
ENSBTAP00000003015-D1 Bos grunniens ENSBTAP00000003015-D1 I 0.000
Alligator_sinensis_CCG014990.1 Alligator sinensis Alligator_sinensis_CCG014990.1 I 0.000
Afo_R012042 Aptenodytes forsteri Afo_R012042 I 0.000
SPU_017287 Strongylocentrotus purpuratus SPU_017287 I 0.000
ENSXMAG00000015432 Xiphophorus maculatus ENSXMAG00000015432 I 0.000
HAND1 Tursiops truncatus ENSTTRG00000002725 I 0.000
HAND1 Takifugu rubripes ENSTRUG00000003992 I 0.000
HAND1 Tetraodon nigroviridis ENSTNIG00000007631 I 0.000
ENSSTOG00000025850 Ictidomys tridecemlineatus ENSSTOG00000025850 I 0.000
ENSSSCG00000017070 Sus scrofa ENSSSCG00000017070 I 0.000
ENSOARG00000009843 Ovis aries ENSOARG00000009843 I 0.000
HAND1 Ornithorhynchus anatinus ENSOANG00000005097 I 0.000
HAND1 Echinops telfairi ENSETEG00000010988 I 0.000
HAND1 Erinaceus europaeus ENSEEUG00000003255 I 0.000
HAND1 Equus caballus ENSECAG00000005327 I 0.000
Hand1 Dipodomys ordii ENSDORG00000015170 I 0.000
HAND1 Dasypus novemcinctus ENSDNOG00000007934 I 0.000
ENSCSAG00000010805 Chlorocebus sabaeus ENSCSAG00000010805 I 0.000
HAND1 Cavia porcellus ENSCPOG00000024064 I 0.000
HAND1 Callithrix jacchus ENSCJAG00000009817 I 0.000
HAND1 Canis familiaris ENSCAFG00000017641 I 0.000
HAND1 Bos taurus ENSBTAG00000002335 I 0.000
ENSAPLG00000007863 Anas platyrhynchos ENSAPLG00000007863 I 0.000
ENSFALG00000008331 Ficedula albicollis ENSFALG00000008331 I 0.000
HAND1 Felis catus ENSFCAG00000014986 I 0.000
ENSNLEG00000016584 Nomascus leucogenys ENSNLEG00000016584 I 0.000
ENSMPUG00000013570 Mustela putorius furo ENSMPUG00000013570 I 0.000
HAND1 Monodelphis domestica ENSMODG00000008678 I 0.000
HAND1 Macaca mulatta ENSMMUG00000010621 I 0.000
HAND1 Myotis lucifugus ENSMLUG00000008901 I 0.000
HAND1 Loxodonta africana ENSLAFG00000017517 I 0.000
ENSLACG00000018666 Latimeria chalumnae ENSLACG00000018666 I 0.000
HAND1 Gorilla gorilla ENSGGOG00000004311 I 0.000
ENSGALG00000026787 Gallus gallus ENSGALG00000026787 I 0.000
HAND1 Gasterosteus aculeatus ENSGACG00000020816 I 0.000
HAND1 Homo sapiens ENSG00000113196 I 0.000
ENSAMEG00000016692 Ailuropoda melanoleuca ENSAMEG00000016692 I 0.000