GSMUA_Achr5G21840_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr5G21840_001 T272492_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.665 0.796
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.665 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr5P21840_001 Myb 14 62
GSMUA_Achr5P21840_001 Myb 68 113

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29693.m002041 Ricinus communis 29693.m002041 N 0.000
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.000
AGL61 Arabidopsis thaliana AT2G24840 N 0.000
Bo4g157220 Brassica oleracea Bo4g157220 N 0.000
Bra032057 Brassica rapa Bra032057 N 0.000
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.000
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.000
cassava39120.m1 Manihot esculenta cassava39120.m1 N 0.000
cassava46357.m1 Manihot esculenta cassava46357.m1 N 0.000
cassava9826.m1 Manihot esculenta cassava9826.m1 N 0.000
cassava9834.m1 Manihot esculenta cassava9834.m1 N 0.000
Ciclev10006439m.g Citrus clementina Ciclev10006439m.g N 0.000
Ciclev10006500m.g Citrus clementina Ciclev10006500m.g N 0.000
Ciclev10006503m.g Citrus clementina Ciclev10006503m.g N 0.000
Ciclev10006530m.g Citrus clementina Ciclev10006530m.g N 0.000
Ciclev10006588m.g Citrus clementina Ciclev10006588m.g N 0.000
Ciclev10006615m.g Citrus clementina Ciclev10006615m.g N 0.000
Ciclev10006708m.g Citrus clementina Ciclev10006708m.g N 0.000
Ciclev10006957m.g Citrus clementina Ciclev10006957m.g N 0.000
Ciclev10006958m.g Citrus clementina Ciclev10006958m.g N 0.000
Ciclev10007010m.g Citrus clementina Ciclev10007010m.g N 0.000
Ciclev10007104m.g Citrus clementina Ciclev10007104m.g N 0.000
Cla009921 Citrullus lanatus Cla009921 N 0.000
Cucsa.047600 Cucumis sativus Cucsa.047600 N 0.000
Eucgr.E02824 Eucalyptus grandis Eucgr.E02824 N 0.000
Eucgr.E02827 Eucalyptus grandis Eucgr.E02827 N 0.000
Eucgr.E02829 Eucalyptus grandis Eucgr.E02829 N 0.000
Eucgr.E02866 Eucalyptus grandis Eucgr.E02866 N 0.000
Eucgr.E02870 Eucalyptus grandis Eucgr.E02870 N 0.000
Eucgr.E02872 Eucalyptus grandis Eucgr.E02872 N 0.000
Eucgr.L01236 Eucalyptus grandis Eucgr.L01236 N 0.000
Gorai.009G284300 Gossypium raimondii Gorai.009G284300 N 0.000
Gorai.010G132900 Gossypium raimondii Gorai.010G132900 N 0.000
Gorai.010G133300 Gossypium raimondii Gorai.010G133300 N 0.000
Gorai.012G147900 Gossypium raimondii Gorai.012G147900 N 0.000
Gorai.012G148000 Gossypium raimondii Gorai.012G148000 N 0.000
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.000
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.000
MDP0000696333 Malus domestica MDP0000696333 N 0.000
orange1.1g038327m.g Citrus sinensis orange1.1g038327m.g N 0.000
orange1.1g043113m.g Citrus sinensis orange1.1g043113m.g N 0.000
orange1.1g044532m.g Citrus sinensis orange1.1g044532m.g N 0.000
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.000
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.000
PDK_20s1551551g001 Phoenix dactylifera PDK_20s1551551g001 I 0.000
Pm008734 Prunus mume Pm008734 N 0.000
Pm030654 Prunus mume Pm030654 N 0.000
POPTR_0001s25850 Populus trichocarpa POPTR_0001s25850 N 0.000
POPTR_0004s13590 Populus trichocarpa POPTR_0004s13590 N 0.000
POPTR_0009s05050 Populus trichocarpa POPTR_0009s05050 N 0.000
PRUPE_ppa021886mg Prunus persica PRUPE_ppa021886mg N 0.000
PRUPE_ppa024983mg Prunus persica PRUPE_ppa024983mg N 0.000
SapurV1A.0619s0200 Salix purpurea SapurV1A.0619s0200 N 0.000
SapurV1A.1613s0060 Salix purpurea SapurV1A.1613s0060 N 0.000
SapurV1A.2714s0010 Salix purpurea SapurV1A.2714s0010 N 0.000
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.000