GSMUA_Achr6G10650_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr6G10650_001 T272525_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB88
M07042_2.00 		Arabidopsis thaliana
NNNHNACGCKCCDHH
DDHGGMGCGTNDNNN		 Dap-seq
OMalley et al.(2016)
MYB88_col_a 		0.696 0.747
MYB88
M07043_2.00 		Arabidopsis thaliana
NNNACGCTCCHNN
NNDGGAGCGTNNN		 Dap-seq
OMalley et al.(2016)
MYB88_colamp_a 		0.696 0.747
MYB88
M11038_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB88_01 		0.696 0.747
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P10650_001 Myb 30 75
GSMUA_Achr6P10650_001 Myb 81 125

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr10G18880_001 Musa acuminata GSMUA_Achr10G18880_001 I 0.821
cassava39089.m1 Manihot esculenta cassava39089.m1 I 0.721
POPTR_0010s10310 Populus trichocarpa POPTR_0010s10310 I 0.721
cassava35260.valid.m1 Manihot esculenta cassava35260.valid.m1 I 0.721
evm.TU.supercontig_183.27 Carica papaya evm.TU.supercontig_183.27 I 0.721
SapurV1A.0062s0030 Salix purpurea SapurV1A.0062s0030 I 0.721
MDP0000165523 Malus domestica MDP0000165523 I 0.721
Gorai.005G139500 Gossypium raimondii Gorai.005G139500 I 0.721
AMTR_s00010p00252990 Amborella trichopoda AMTR_s00010p00252990 I 0.705
29736.m002013 Ricinus communis 29736.m002013 I 0.701
GLYMA18G16040 Glycine max GLYMA18G16040 I 0.699
MYB88 Arabidopsis thaliana AT2G02820 D 0.696
MYB88 Arabidopsis lyrata fgenesh2_kg.5__181__AT2G02820.2 I 0.696
Lus10012847.g Linum usitatissimum Lus10012847.g I 0.694
Lus10030494.g Linum usitatissimum Lus10030494.g I 0.694
GLYMA02G02310 Glycine max GLYMA02G02310 I 0.691
Gorai.013G083300 Gossypium raimondii Gorai.013G083300 I 0.691
Ciclev10031405m.g Citrus clementina Ciclev10031405m.g I 0.691
MTR_5g038910 Medicago truncatula MTR_5g038910 I 0.691
Ca_18779 Cicer arietinum Ca_18779 I 0.691
orange1.1g044977m.g Citrus sinensis orange1.1g044977m.g I 0.691
PRUPE_ppa017536mg Prunus persica PRUPE_ppa017536mg I 0.691
TCM_011776 Theobroma cacao TCM_011776 I 0.691
Pm006532 Prunus mume Pm006532 I 0.691
VIT_01s0026g01910 Vitis vinifera VIT_01s0026g01910 I 0.688
SapurV1A.0200s0020 Salix purpurea SapurV1A.0200s0020 I 0.682
PK05123.1 Cannabis sativa PK05123.1 I 0.682
POPTR_0008s14790 Populus trichocarpa POPTR_0008s14790 I 0.682
GLYMA01G05190 Glycine max GLYMA01G05190 I 0.682
GLYMA08G40950 Glycine max GLYMA08G40950 I 0.679
MDP0000210970 Malus domestica MDP0000210970 I 0.676
Bra019658 Brassica rapa Bra019658 I 0.676
Thhalv10007659m.g Eutrema salsugineum Thhalv10007659m.g I 0.676
MTR_8g468380 Medicago truncatula MTR_8g468380 I 0.672
Eucgr.B03417 Eucalyptus grandis Eucgr.B03417 I 0.671
Carubv10017119m.g Capsella rubella Carubv10017119m.g I 0.668
Cagra.0534s0022 Capsella grandiflora Cagra.0534s0022 I 0.668
Bo5g019500 Brassica oleracea Bo5g019500 I 0.667
Aquca_002_00543 Aquilegia coerulea Aquca_002_00543 I 0.662