GSMUA_Achr7G18080_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr7G18080_001 T272585_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.820 0.903
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.820 0.903
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.800 0.882
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.800 0.882
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.796 0.882
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.796 0.882
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.791 0.871
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.791 0.871
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.769 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P18080_001 Myb 14 61
GSMUA_Achr7P18080_001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

310 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000018305 Ailuropoda melanoleuca ENSAMEG00000018305 I 0.000
PROX2 Tupaia belangeri ENSTBEG00000014423 I 0.000
prox1a Tetraodon nigroviridis ENSTNIG00000016378 I 0.000
prox1a Takifugu rubripes ENSTRUG00000013890 I 0.000
ENSTSYG00000002059 Tarsius syrichta ENSTSYG00000002059 I 0.000
PROX1 Tursiops truncatus ENSTTRG00000003405 I 0.000
ENSXMAG00000009972 Xiphophorus maculatus ENSXMAG00000009972 I 0.000
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I 0.000
prox1.L Xenopus laevis XB-GENE-485331 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
PROX1 Tupaia belangeri ENSTBEG00000013162 I 0.000
ENSSTOG00000026238 Ictidomys tridecemlineatus ENSSTOG00000026238 I 0.000
PROX1 Choloepus hoffmanni ENSCHOG00000010660 I 0.000
PROX1 Callithrix jacchus ENSCJAG00000015514 I 0.000
Prox1 Dipodomys ordii ENSDORG00000007622 I 0.000
PROX1 Echinops telfairi ENSETEG00000010042 I 0.000
PROX2 Felis catus ENSFCAG00000028658 I 0.000
ENSLACG00000013691 Latimeria chalumnae ENSLACG00000013691 I 0.000
ENSMEUG00000013465 Macropus eugenii ENSMEUG00000013465 I 0.000
PROX1 Microcebus murinus ENSMICG00000011593 I 0.000
PROX2 Myotis lucifugus ENSMLUG00000005898 I 0.000
PROX1 Oryctolagus cuniculus ENSOCUG00000008274 I 0.000
PROX1 Ochotona princeps ENSOPRG00000005115 I 0.000
prox1a Oryzias latipes ENSORLG00000014947 I 0.000
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I 0.000
ENSPMAG00000006606 Petromyzon marinus ENSPMAG00000006606 I 0.000
PROX1 Pteropus vampyrus ENSPVAG00000009067 I 0.000
ENSSHAG00000016547 Sarcophilus harrisii ENSSHAG00000016547 I 0.000
ENSSTOG00000023253 Ictidomys tridecemlineatus ENSSTOG00000023253 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000