CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr9G05930_001
(
Musa acuminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GSMUA_Achr9G05930_001
T272651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN
NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.729
0.851
AT1G74840
M02291_2.00
Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN
PBM
Weirauch et al.(2014)
pTH7074
0.729
0.851
AT1G74840
M07037_2.00
Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD
Dap-seq
OMalley et al.(2016)
At1g74840_col100_a
0.729
0.851
AT1G74840
M07038_2.00
Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD
Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a
0.729
0.851
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD
HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.717
0.851
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN
NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.711
0.872
0600010132
M02360_2.00
Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN
PBM
Weirauch et al.(2014)
pTH9441
0.693
0.872
AT3G16350
M01078_2.00
Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN
PBM
Sullivan et al.(2014)
pTH7149
0.690
0.830
PK29550.1
M02358_2.00
Cannabis sativa
NNHDATCYNN
NNRGATHDNN
PBM
Weirauch et al.(2014)
pTH9595
0.680
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr9P05930_001
Myb
99
146
GVAWTEEEHKLFLAGLERLGRGDWRGISRNFVTTRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Musa acuminata
TFs
267 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy