GSMUA_Achr9G22600_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr9G22600_001 T272678_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB73
M07114_2.00
Arabidopsis thaliana
TAACBGWHWHW

WDWDWCVGTTA
Dap-seq
OMalley et al.(2016)
MYB73_col_a
0.757 0.849
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY

RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.753 0.860
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.753 0.839
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN

NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.753 0.839
MYB44
M01082_2.00
Arabidopsis thaliana
HAACBRHHN

NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH7078
0.753 0.849
MYB44
M07155_2.00
Arabidopsis thaliana
HDTAACBGWHW

WDWCVGTTAHD
Dap-seq
OMalley et al.(2016)
MYB44_colamp_a
0.753 0.849
MYB44
M07156_2.00
Arabidopsis thaliana
HAACBRWHWWAACBGHHWH

DWDDCVGTTWWDWYVGTTD
Dap-seq
OMalley et al.(2016)
MYB44_col
0.753 0.849
F3A4.140
M02299_2.00
Arabidopsis thaliana
YAACBGYY

RRCVGTTR
PBM
Weirauch et al.(2014)
pTH7112
0.732 0.828
F3A4.140
M07095_2.00
Arabidopsis thaliana
TAACBGYHWHNNHNN

NNDNNDWDRCVGTTA
Dap-seq
OMalley et al.(2016)
MYB77_col_a
0.732 0.828
F3A4.140
M07096_2.00
Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV

BKTWWDWTASGGTTRCGGTT
Dap-seq
OMalley et al.(2016)
MYB77_colamp_a
0.732 0.828
F3A4.140
M02701_2.00
Arabidopsis thaliana
SYAACYGYCVHBN

NVDBGRCRGTTRS
SELEX
Mathelier et al.(2014)
MA0575.1
0.732 0.828
F3A4.140
M11044_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB77_01
0.732 0.828
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.728 0.817
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.665 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr9P22600_001 Myb 5 51
GSMUA_Achr9P22600_001 Myb 57 102

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

Invalid Input OrderBy

314 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action