LPERR01G31650 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR01G31650 T273648_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.746 0.879
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.718 0.814
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.675 0.771
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.675 0.771
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR01G31650.1 Myb 64 110
LPERR01G31650.1 Myb 116 162
LPERR01G31650.1 Myb 168 213
LPERR01G31650.2 Myb 64 110
LPERR01G31650.2 Myb 116 162
LPERR01G31650.2 Myb 168 213

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr10G26610_001 Musa acuminata GSMUA_Achr10G26610_001 I 0.841
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.840
MYB3R-2 Oryza sativa OS01G0841500 I 0.840
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.840
evm.TU.supercontig_228.17 Carica papaya evm.TU.supercontig_228.17 I 0.838
Gorai.001G249400 Gossypium raimondii Gorai.001G249400 I 0.824
Pm002704 Prunus mume Pm002704 I 0.824
PRUPE_ppa003208mg Prunus persica PRUPE_ppa003208mg I 0.824
SapurV1A.0001s1810 Salix purpurea SapurV1A.0001s1810 I 0.824
POPTR_0006s08570 Populus trichocarpa POPTR_0006s08570 I 0.822
Bra034067 Brassica rapa Bra034067 I 0.821
Bo1g144510 Brassica oleracea Bo1g144510 I 0.821
BRADI2G54640 Brachypodium distachyon BRADI2G54640 I 0.821
29846.m000184 Ricinus communis 29846.m000184 I 0.818
Eucgr.K03133 Eucalyptus grandis Eucgr.K03133 I 0.818
Lus10024394.g Linum usitatissimum Lus10024394.g I 0.818
Lus10025351.g Linum usitatissimum Lus10025351.g I 0.818
TRAES3BF104600030CFD_g Triticum aestivum TRAES3BF104600030CFD_g I 0.817
Traes_3AL_386795528 Triticum aestivum Traes_3AL_386795528 I 0.817
Traes_3DL_6BBC889A1 Triticum aestivum Traes_3DL_6BBC889A1 I 0.817
orange1.1g009402m.g Citrus sinensis orange1.1g009402m.g I 0.816
Ciclev10011452m.g Citrus clementina Ciclev10011452m.g I 0.816
VIT_08s0007g00360 Vitis vinifera VIT_08s0007g00360 I 0.810
Thhalv10020579m.g Eutrema salsugineum Thhalv10020579m.g I 0.805
chr1.CM0147.520.nd Lotus japonicus chr1.CM0147.520.nd I 0.804
TCM_021936 Theobroma cacao TCM_021936 I 0.804
cassava12645.valid.m1 Manihot esculenta cassava12645.valid.m1 I 0.802
Sb03g039470 Sorghum bicolor Sb03g039470 I 0.802
GRMZM2G081919 Zea mays GRMZM2G081919 I 0.797
Gorai.006G172800 Gossypium raimondii Gorai.006G172800 I 0.796
MDP0000219581 Malus domestica MDP0000219581 I 0.794
Pavir.Ea03349 Panicum virgatum Pavir.Ea03349 I 0.788
Pavir.Eb03676 Panicum virgatum Pavir.Eb03676 I 0.788
Si000842m.g Setaria italica Si000842m.g I 0.788
Aquca_003_00045 Aquilegia coerulea Aquca_003_00045 I 0.782
fgenesh1_pg.C_scaffold_3000839 Arabidopsis lyrata fgenesh1_pg.C_scaffold_3000839 I 0.781
mgf019610m Mimulus guttatus mgf019610m I 0.778
GLYMA07G15820 Glycine max GLYMA07G15820 I 0.778
Cucsa.175460 Cucumis sativus Cucsa.175460 I 0.777
OLONG_011208 Oryza longistaminata OLONG_011208 I 0.773
OB01G45570 Oryza brachyantha OB01G45570 I 0.770
MYB3R-3 Arabidopsis thaliana AT3G09370 I 0.769
GSMUA_Achr7G10520_001 Musa acuminata GSMUA_Achr7G10520_001 I 0.768
MTR_7g061330 Medicago truncatula MTR_7g061330 I 0.766
Bo5g139340 Brassica oleracea Bo5g139340 I 0.766
MTR_7g461410 Medicago truncatula MTR_7g461410 I 0.766
Bra029762 Brassica rapa Bra029762 I 0.765
GLYMA18G39740 Glycine max GLYMA18G39740 I 0.762
Carubv10013377m.g Capsella rubella Carubv10013377m.g I 0.761
Cagra.2515s0028 Capsella grandiflora Cagra.2515s0028 I 0.761
Bostr.6251s0040 Boechera stricta Bostr.6251s0040 I 0.760
Cagra.0487s0012 Capsella grandiflora Cagra.0487s0012 I 0.760
Carubv10000643m.g Capsella rubella Carubv10000643m.g I 0.760
Bostr.22252s0130 Boechera stricta Bostr.22252s0130 I 0.759
Thhalv10013211m.g Eutrema salsugineum Thhalv10013211m.g I 0.757
Cla018173 Citrullus lanatus Cla018173 I 0.754
MYB3R5 Arabidopsis thaliana AT5G02320 D 0.746
PK11664.1 Cannabis sativa PK11664.1 I 0.746
ATMYB3R5 Arabidopsis lyrata fgenesh1_pm.C_scaffold_6000124 I 0.746
GSMUA_Achr6G05030_001 Musa acuminata GSMUA_Achr6G05030_001 I 0.741
Bra009597 Brassica rapa Bra009597 I 0.739
gene18416-v1.0-hybrid Fragaria vesca gene18416-v1.0-hybrid I 0.738
AMTR_s00012p00208260 Amborella trichopoda AMTR_s00012p00208260 I 0.738
Solyc09g010820.2 Solanum lycopersicum Solyc09g010820.2 I 0.724
PGSC0003DMG400008908 Solanum tuberosum PGSC0003DMG400008908 I 0.724
Bo9g184660 Brassica oleracea Bo9g184660 I 0.723
PK12011.1 Cannabis sativa PK12011.1 D 0.718
OPUNC05G16800 Oryza punctata OPUNC05G16800 I 0.708
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.704
TRIUR3_29290 Triticum urartu TRIUR3_29290 I 0.701
MDP0000295807 Malus domestica MDP0000295807 I 0.698
Si021484m.g Setaria italica Si021484m.g I 0.697
Traes_1BL_C25B5DDB4 Triticum aestivum Traes_1BL_C25B5DDB4 I 0.695
BGIOSGA017917 Oryza indica BGIOSGA017917 I 0.694
ONIVA05G20060 Oryza nivara ONIVA05G20060 I 0.694
OBART05G19200 Oryza barthii OBART05G19200 I 0.694
ORUFI05G20390 Oryza rufipogon ORUFI05G20390 I 0.694
Traes_1DL_B26A733D4 Triticum aestivum Traes_1DL_B26A733D4 I 0.693
MDP0000179225 Malus domestica MDP0000179225 I 0.691
Ca_14925 Cicer arietinum Ca_14925 I 0.687
Bo3g062020 Brassica oleracea Bo3g062020 N 0.685
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.685
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.683
29794.m003447 Ricinus communis 29794.m003447 I 0.681
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.679
F775_12121 Aegilops tauschii F775_12121 N 0.678
TRIUR3_33469 Triticum urartu TRIUR3_33469 N 0.678
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.677
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.676
GLYMA17G26240 Glycine max GLYMA17G26240 I 0.676
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.676
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.676
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.676
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.676
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.676
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.675
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.675
OS05G0459000 Oryza sativa OS05G0459000 I 0.675
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.675
ORGLA05G0166300 Oryza glaberrima ORGLA05G0166300 I 0.675
Bra034531 Brassica rapa Bra034531 I 0.674
Bo3g171130 Brassica oleracea Bo3g171130 I 0.674
Gorai.001G028200 Gossypium raimondii Gorai.001G028200 I 0.673
GLYMA03G19470 Glycine max GLYMA03G19470 I 0.672
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.671
Bra001311 Brassica rapa Bra001311 N 0.671
Cla023357 Citrullus lanatus Cla023357 I 0.671
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.671
OBART01G36770 Oryza barthii OBART01G36770 N 0.669
OMERI01G33900 Oryza meridionalis OMERI01G33900 N 0.669
ORUFI01G40130 Oryza rufipogon ORUFI01G40130 N 0.669
ONIVA10G04750 Oryza nivara ONIVA10G04750 N 0.669
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.668
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.668
TCM_047091 Theobroma cacao TCM_047091 I 0.668
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.667
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.667
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.666
Cla022565 Citrullus lanatus Cla022565 I 0.666
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.666
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.666
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.666
MLOC_10556 Hordeum vulgare MLOC_10556 I 0.665
Bo7g115810 Brassica oleracea Bo7g115810 I 0.664
Pm005124 Prunus mume Pm005124 I 0.664
OBART01G08110 Oryza barthii OBART01G08110 I 0.663
OB12G16480 Oryza brachyantha OB12G16480 I 0.663
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.663
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.663
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.663
OS12G0238000 Oryza sativa OS12G0238000 I 0.663
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.663
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.663
Bo1g010040 Brassica oleracea Bo1g010040 I 0.662
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.662
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.661