CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR01G31650
(
Leersia perrieri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
LPERR01G31650
T273648_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB3R5
M07116_2.00
Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN
Dap-seq
OMalley et al.(2016)
MYB3R5_col_a
0.746
0.879
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN
NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.718
0.814
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.675
0.771
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.675
0.771
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR01G31650.1
Myb
64
110
KGGWTPEEDETLRKAVEAYKGRSWKKIAECFPYRTEVQCLHRWQKVL
LPERR01G31650.1
Myb
116
162
KGPWTQEEDDQIIELVKKYGPTKWSVIAKALPGRIGKQCRERWHNHL
LPERR01G31650.1
Myb
168
213
KDAWTAEEELALINAHQVYGNKWAEIAKVLPGRTDNSIKNHWNSSL
LPERR01G31650.2
Myb
64
110
KGGWTPEEDETLRKAVEAYKGRSWKKIAECFPYRTEVQCLHRWQKVL
LPERR01G31650.2
Myb
116
162
KGPWTQEEDDQIIELVKKYGPTKWSVIAKALPGRIGKQCRERWHNHL
LPERR01G31650.2
Myb
168
213
KDAWTAEEELALINAHQVYGNKWAEIAKVLPGRTDNSIKNHWNSSL
Links
Other
Myb/SANT
family TFs
Other
Leersia perrieri
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy