LPERR05G03900 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR05G03900 T273721_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.722 0.696
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.722 0.696
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.673 0.696
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.679 0.674
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.679 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR05G03900.1 Myb 20 65
LPERR05G03900.2 Myb 20 65
LPERR05G03900.3 Myb 20 65

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI05G04560 Oryza rufipogon ORUFI05G04560 I 0.797
OBART05G04360 Oryza barthii OBART05G04360 I 0.797
ONIVA05G04710 Oryza nivara ONIVA05G04710 I 0.797
OS05G0162800 Oryza sativa OS05G0162800 I 0.797
OMERI05G04320 Oryza meridionalis OMERI05G04320 I 0.789
OB05G14050 Oryza brachyantha OB05G14050 I 0.789
OGLUM05G04280 Oryza glumaepatula OGLUM05G04280 I 0.789
OBART05G04370 Oryza barthii OBART05G04370 I 0.789
TRIUR3_24634 Triticum urartu TRIUR3_24634 I 0.751
Traes_1BS_24DBD38A8 Triticum aestivum Traes_1BS_24DBD38A8 I 0.751
MLOC_5590 Hordeum vulgare MLOC_5590 I 0.751
BGIOSGA018757 Oryza indica BGIOSGA018757 I 0.750
F775_22448 Aegilops tauschii F775_22448 I 0.745
OS01G0156000 Oryza sativa OS01G0156000 I 0.737
OBART01G03720 Oryza barthii OBART01G03720 I 0.737
ORUFI01G03800 Oryza rufipogon ORUFI01G03800 I 0.737
ONIVA01G04110 Oryza nivara ONIVA01G04110 I 0.737
OMERI01G03530 Oryza meridionalis OMERI01G03530 I 0.737
LPERR01G03340 Leersia perrieri LPERR01G03340 I 0.737
BGIOSGA002364 Oryza indica BGIOSGA002364 I 0.737
OPUNC01G03310 Oryza punctata OPUNC01G03310 I 0.737
OGLUM01G03980 Oryza glumaepatula OGLUM01G03980 I 0.737
ORGLA01G0032300 Oryza glaberrima ORGLA01G0032300 I 0.737
Sb03g005480 Sorghum bicolor Sb03g005480 I 0.731
Bo4g006930 Brassica oleracea Bo4g006930 I 0.728
Bra004503 Brassica rapa Bra004503 I 0.728
Bostr.25993s0083 Boechera stricta Bostr.25993s0083 I 0.722
CCA1 Arabidopsis thaliana AT2G46830 D 0.722
Cagra.0050s0017 Capsella grandiflora Cagra.0050s0017 I 0.722
CCA1 Arabidopsis lyrata scaffold_403655.1 I 0.722
Carubv10022831m.g Capsella rubella Carubv10022831m.g I 0.722
Si002704m.g Setaria italica Si002704m.g I 0.712
Si038786m.g Setaria italica Si038786m.g I 0.709
Pavir.J37379 Panicum virgatum Pavir.J37379 N 0.706
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.701
GRMZM2G115070 Zea mays GRMZM2G115070 I 0.699
Sb01g012460 Sorghum bicolor Sb01g012460 I 0.699
Lus10005134.g Linum usitatissimum Lus10005134.g I 0.697
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.697
Lus10030184.g Linum usitatissimum Lus10030184.g I 0.697
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.697
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.689
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.689
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.689
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.689
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.689
Si014685m.g Setaria italica Si014685m.g I 0.689
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.689
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.689
mgf021826m Mimulus guttatus mgf021826m I 0.689
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.689
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.689
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.689
OS08G0157600 Oryza sativa OS08G0157600 D 0.689
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.689
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.689
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.689
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.689
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.689
F775_26024 Aegilops tauschii F775_26024 I 0.689
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.689
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.689
OB08G13700 Oryza brachyantha OB08G13700 I 0.689
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.689
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.689
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.689
PGSC0003DMG400025632 Solanum tuberosum PGSC0003DMG400025632 I 0.687
EuGene.0000110367 Micromonas pusilla EuGene.0000110367 I 0.687
Solyc03g098320.2 Solanum lycopersicum Solyc03g098320.2 I 0.687
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.684
BRADI2G34670 Brachypodium distachyon BRADI2G34670 I 0.684
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.684
gw1.9.308.1 Chlorella NC64A gw1.9.308.1 I 0.683
MLOC_59912 Hordeum vulgare MLOC_59912 I 0.683
CHLREDRAFT_123164 Chlamydomonas reinhardtii CHLREDRAFT_123164 I 0.683
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I 0.679
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I 0.679
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I 0.679
LHY Arabidopsis lyrata fgenesh2_kg.1__131__AT1G01060.3 I 0.679
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I 0.679
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.679
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I 0.679
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.679
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.679
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I 0.679
Bra033291 Brassica rapa Bra033291 I 0.679
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.679
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I 0.679
Bo5g002760 Brassica oleracea Bo5g002760 I 0.679
GLYMA03G42260 Glycine max GLYMA03G42260 I 0.679
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I 0.679
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.679
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I 0.679
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I 0.679
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I 0.679
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I 0.679
MTR_7g118330 Medicago truncatula MTR_7g118330 I 0.679
LHY Arabidopsis thaliana AT1G01060 D 0.679
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I 0.679
Cucsa.349800 Cucumis sativus Cucsa.349800 I 0.679
TCM_005021 Theobroma cacao TCM_005021 I 0.679
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I 0.679
Pm028731 Prunus mume Pm028731 I 0.679
30076.m004464 Ricinus communis 30076.m004464 I 0.679
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I 0.679
PK20866.1 Cannabis sativa PK20866.1 I 0.679
GLYMA07G05410 Glycine max GLYMA07G05410 I 0.679
GLYMA19G45030 Glycine max GLYMA19G45030 I 0.679
GLYMA16G01980 Glycine max GLYMA16G01980 I 0.679
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I 0.679
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I 0.677
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I 0.677
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I 0.677
mgf014004m Mimulus guttatus mgf014004m I 0.677
EuGene.0400010070 Ostreococcus RCC809 EuGene.0400010070 I 0.671
TRIUR3_06252 Triticum urartu TRIUR3_06252 I 0.670
F775_22242 Aegilops tauschii F775_22242 I 0.670
Bra030496 Brassica rapa Bra030496 I 0.669
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.669
MTR_3g064500 Medicago truncatula MTR_3g064500 I 0.669
EFA77680.1 Polysphondylium pallidum EFA77680.1 I 0.668
CHLREDRAFT_112628 Chlamydomonas reinhardtii CHLREDRAFT_112628 I 0.668
GRMZM2G415077 Zea mays GRMZM2G415077 N 0.668
Pavir.J28275 Panicum virgatum Pavir.J28275 N 0.665
Bo3g001090 Brassica oleracea Bo3g001090 I 0.665
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.664
Lus10010100.g Linum usitatissimum Lus10010100.g I 0.663