CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR08G19430
(
Leersia perrieri
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
LPERR08G19430
T273795_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK21166.1
M01281_2.00
Cannabis sativa
HACCWAMY
RKTWGGTD
PBM
Lambert et al.(2019)
pTH11255
0.762
0.860
MYB43
M07127_2.00
Arabidopsis thaliana
NYYYACCWAMYWH
DWRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB43_col_a
0.729
0.806
MYB99
M07151_2.00
Arabidopsis thaliana
NYYYACCWAMYHH
DDRKTWGGTRRRN
Dap-seq
OMalley et al.(2016)
MYB99_col_a
0.689
0.753
MYB99
M07152_2.00
Arabidopsis thaliana
YHYACCTAMYH
DRKTAGGTRDR
Dap-seq
OMalley et al.(2016)
MYB99_colamp_a
0.689
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR08G19430.1
Myb
14
61
RGPWTAEEDKKLISFILTHGRCCWRAVPMLAGLLRCGKSCRLRWTNYL
LPERR08G19430.1
Myb
67
112
RGLLTADEEQLVVDLHAKLGNRWSKIAAKLPGRTDNEIKNHWNTHI
Links
Other
Myb/SANT
family TFs
Other
Leersia perrieri
TFs
246 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_046560
Albugo laibachii
ALNC14_046560
N
0.000
F443_17385
Phytophthora parasitica
F443_17385
N
0.000
fgenesh-par_contig_1486-abinit-gene-0.19
Pythium arrhenomanes
fgenesh-par_contig_1486-abinit-gene-0.19
N
0.000
fgenesh-piw_contig_146-abinit-gene-0.45
Pythium iwayamai
fgenesh-piw_contig_146-abinit-gene-0.45
N
0.000
fgenesh-pve_contig_197-abinit-gene-0.68
Pythium vexans
fgenesh-pve_contig_197-abinit-gene-0.68
N
0.000
fgenesh_scip_prom.46568.2101
Phytophthora kernoviae
fgenesh_scip_prom.46568.2101
N
0.000
HpaG805679
Hyaloperonospora arabidopsidis
HpaG805679
N
0.000
maker-pir_contig_358-snap-gene-0.15
Pythium irregulare
maker-pir_contig_358-snap-gene-0.15
N
0.000
Physo132292
Phytophthora sojae
Physo132292
N
0.000
PITG_05149
Phytophthora infestans
PITG_05149
N
0.000
PYU1_G014513
Pythium ultimum
PYU1_G014513
N
0.000
snap-pag1_scaffold_896-abinit-gene-0.11
Pythium aphanidermatum
snap-pag1_scaffold_896-abinit-gene-0.11
N
0.000
SPRG_02269
Saprolegnia parasitica
SPRG_02269
N
0.000