CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
maker-pag1_scaffold_406-snap-gene-0.12
(
Pythium aphanidermatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
maker-pag1_scaffold_406-snap-gene-0.12
T274003_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPrPA00000020942
Myb
42
88
GQRWTPEQDDALRKAVEKYGQKNWKSIAAEVEGRNHSQCLQRWNKVL
EPrPA00000020942
Myb
94
139
KGHWSYEEDSILERMVLHGCHSWTEVSANIPGRTAKQCRERWRNHL
EPrPA00000020942
Myb
145
206
KAPFTPEEDITIQQAYEQLGNRWTQIAELLPETLRLTREVQCVLRQPQGRTEDAVKMRWKAL
Links
Other
Myb/SANT
family TFs
Other
Pythium aphanidermatum
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-par_contig_1799-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1799-fgenesh-gene-0.0
N
0.831
maker-pir_contig_225-snap-gene-0.15
Pythium irregulare
maker-pir_contig_225-snap-gene-0.15
N
0.753
PYU1_G004815
Pythium ultimum
PYU1_G004815
N
0.746
maker-piw_contig_308-snap-gene-0.10
Pythium iwayamai
maker-piw_contig_308-snap-gene-0.10
N
0.746
HpaG800700
Hyaloperonospora arabidopsidis
HpaG800700
N
0.728
fgenesh_masked-par_contig_2874-abinit-gene-0.4
Pythium arrhenomanes
fgenesh_masked-par_contig_2874-abinit-gene-0.4
N
0.721
Physo138656
Phytophthora sojae
Physo138656
N
0.716
Phyra96060
Phytophthora ramorum
Phyra96060
N
0.716
F443_16638
Phytophthora parasitica
F443_16638
N
0.716
PITG_05989
Phytophthora infestans
PITG_05989
N
0.698
fgenesh1_kg.C_scaffold_813000002
Phytophthora capsici
fgenesh1_kg.C_scaffold_813000002
N
0.693