maker-par_contig_1627-snap-gene-0.2 (Pythium arrhenomanes)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 maker-par_contig_1627-snap-gene-0.2 T274040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Phyra80938
M02333_2.00
Phytophthora ramorum
NNGWABCYWN

NWRGVTWCNN
PBM
Weirauch et al.(2014)
pTH7925
0.684 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPR00000021299 Myb 115 161

Links

Other Myb/SANT family TFs
Other Pythium arrhenomanes TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.684
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.684
Phyra80938 Phytophthora ramorum Phyra80938 D 0.684
Physo132941 Phytophthora sojae Physo132941 I 0.684
maker-pag1_scaffold_266-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_266-fgenesh-gene-0.3 N 0.799
maker-pag1_scaffold_266-fgenesh-gene-0.2 Pythium aphanidermatum maker-pag1_scaffold_266-fgenesh-gene-0.2 N 0.786
maker-par_contig_1566-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_1566-fgenesh-gene-0.0 I 0.841
maker-par_contig_1627-fgenesh-gene-0.1 Pythium arrhenomanes maker-par_contig_1627-fgenesh-gene-0.1 I 0.909
maker-par_contig_2254-snap-gene-0.1 Pythium arrhenomanes maker-par_contig_2254-snap-gene-0.1 N 0.843
maker-par_contig_2748-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2748-fgenesh-gene-0.0 N 0.709
maker-par_contig_631-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_631-snap-gene-0.2 N 0.754
maker-pir_contig_524-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_524-fgenesh-gene-0.4 N 0.670
maker-pir_contig_516-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.2 I 0.694
PYU1_G003090 Pythium ultimum PYU1_G003090 N 0.663
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.662
maker-pve_contig_1036-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_1036-fgenesh-gene-0.2 N 0.725