maker-pir_contig_548-snap-gene-0.6 (Pythium irregulare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 maker-pir_contig_548-snap-gene-0.6 T274157_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra80938
M02333_2.00 		Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN		 PBM
Weirauch et al.(2014)
pTH7925 		0.677 0.717
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPI00000020306 Myb 36 81

Links

Other Myb/SANT family TFs
Other Pythium irregulare TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PYU1_G002832 Pythium ultimum PYU1_G002832 N 0.735
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.726
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.708
fgenesh_scip_prom.46568.9767 Phytophthora kernoviae fgenesh_scip_prom.46568.9767 N 0.706
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.704
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.704
PYU1_G002831 Pythium ultimum PYU1_G002831 N 0.696
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.696
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.691
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I 0.686
Physo132945 Phytophthora sojae Physo132945 I 0.683
Phyra80938 Phytophthora ramorum Phyra80938 D 0.677
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.677
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.677
maker-par_contig_8416-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_8416-snap-gene-0.0 N 0.677
Physo132941 Phytophthora sojae Physo132941 I 0.677
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.662
maker-pir_contig_516-fgenesh-gene-0.8 Pythium irregulare maker-pir_contig_516-fgenesh-gene-0.8 N 0.662