CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_10322
(
Hordeum vulgare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MLOC_10322
T274429_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.776
0.806
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.775
0.828
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.739
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_10322.1
Myb
155
201
KGPWSPEEDAMLTNLVMRDGARNWTTIARGIPGRSGKSCRLRWCNQL
MLOC_10322.1
Myb
207
252
RKPFTEEEDQMIISAHAIHGNKWASIAKLLVGRTDNAIKNHWNSTL
MLOC_10322.2
Myb
1
36
MIISAHAIHGNKWASIAKLLVGRTDNAIKNHWNSTL
MLOC_10322.3
Myb
155
201
KGPWSPEEDAMLTNLVMRDGARNWTTIARGIPGRSGKSCRLRWCNQL
MLOC_10322.3
Myb
207
253
RKPFTAEEEDQMIISAHAIHGNKWASIAKLLVGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Hordeum vulgare
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_3AL_C729D25F8
Triticum aestivum
Traes_3AL_C729D25F8
N
0.909
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.884
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.855
Traes_3DL_0F82AC8F0
Triticum aestivum
Traes_3DL_0F82AC8F0
N
0.821
mgf018580m
Mimulus guttatus
mgf018580m
I
0.804
GSMUA_Achr9G03720_001
Musa acuminata
GSMUA_Achr9G03720_001
I
0.795
TRIUR3_08319
Triticum urartu
TRIUR3_08319
I
0.791
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.784
MDP0000284922
Malus domestica
MDP0000284922
I
0.781
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.780
Si001686m.g
Setaria italica
Si001686m.g
I
0.779
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.778
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.776
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.776
MYB1
Arabidopsis thaliana
AT3G09230
D
0.776
PK07741.1
Cannabis sativa
PK07741.1
D
0.775
MDP0000478512
Malus domestica
MDP0000478512
I
0.775
Pm018862
Prunus mume
Pm018862
I
0.774
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.774
TCM_042629
Theobroma cacao
TCM_042629
I
0.774
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.773
LjSGA_068650.1
Lotus japonicus
LjSGA_068650.1
N
0.773
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.772
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.770
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.767
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.767
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.767
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.766
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.766
F775_09670
Aegilops tauschii
F775_09670
I
0.764
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.760
GLYMA02G42030
Glycine max
GLYMA02G42030
I
0.760
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.758
MDP0000807341
Malus domestica
MDP0000807341
I
0.758
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.758
PDK_20s1413971g002
Phoenix dactylifera
PDK_20s1413971g002
N
0.755
Pavir.Ea03398
Panicum virgatum
Pavir.Ea03398
I
0.755
Pavir.J13677
Panicum virgatum
Pavir.J13677
I
0.755
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.755
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.755
Pm002576
Prunus mume
Pm002576
I
0.754
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.749
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.749
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.749
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.748
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.748
PK12959.1
Cannabis sativa
PK12959.1
I
0.748
OMERI01G34370
Oryza meridionalis
OMERI01G34370
I
0.747
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.746
Sb03g039950
Sorghum bicolor
Sb03g039950
I
0.745
TCM_021796
Theobroma cacao
TCM_021796
I
0.745
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.745
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.745
OPUNC01G36300
Oryza punctata
OPUNC01G36300
I
0.744
OBART01G37390
Oryza barthii
OBART01G37390
I
0.744
ONIVA01G42300
Oryza nivara
ONIVA01G42300
I
0.744
OGLUM01G41330
Oryza glumaepatula
OGLUM01G41330
I
0.744
ORUFI01G40770
Oryza rufipogon
ORUFI01G40770
I
0.744
BGIOSGA000485
Oryza indica
BGIOSGA000485
I
0.744
OS01G0850400
Oryza sativa
OS01G0850400
I
0.744
OLONG_001357
Oryza longistaminata
OLONG_001357
I
0.744
ORGLA01G0312200
Oryza glaberrima
ORGLA01G0312200
I
0.744
MDP0000203733
Malus domestica
MDP0000203733
I
0.742
MDP0000319124
Malus domestica
MDP0000319124
I
0.742
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.740
Bra007186
Brassica rapa
Bra007186
I
0.740
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.739
Si017917m.g
Setaria italica
Si017917m.g
I
0.739
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.739
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.739
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.739
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.739
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.739
OS02G0187700
Oryza sativa
OS02G0187700
D
0.739
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.739
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.739
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.739
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.739
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.739
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.739
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.739
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.738
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.737
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.737
29801.m003096
Ricinus communis
29801.m003096
I
0.736
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.735
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.735
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.735
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.734
gene18756-v1.0-hybrid
Fragaria vesca
gene18756-v1.0-hybrid
I
0.734
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.734
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.734
Si032789m.g
Setaria italica
Si032789m.g
I
0.734
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.734
mgf025567m
Mimulus guttatus
mgf025567m
I
0.731
Bo8g090160
Brassica oleracea
Bo8g090160
I
0.731
Bostr.20505s0177
Boechera stricta
Bostr.20505s0177
I
0.731
Thhalv10010431m.g
Eutrema salsugineum
Thhalv10010431m.g
I
0.731
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.730
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.730
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.730
OBART09G00310
Oryza barthii
OBART09G00310
I
0.730
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.730
OB09G10200
Oryza brachyantha
OB09G10200
I
0.730
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.730
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.730
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.730
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.730
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.730
OS09G0106700
Oryza sativa
OS09G0106700
I
0.730
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.730
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.730
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.730
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.729
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.728
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.726
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.725
Bo24301s010
Brassica oleracea
Bo24301s010
N
0.724
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.724
LPERR01G32110
Leersia perrieri
LPERR01G32110
I
0.723
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.723
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.721
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.721
SapurV1A.0262s0270
Salix purpurea
SapurV1A.0262s0270
I
0.721
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.719
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.719
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.718
27798.m000612
Ricinus communis
27798.m000612
I
0.718
Cla018417
Citrullus lanatus
Cla018417
I
0.718
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.717
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.717
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.715
OB01G46120
Oryza brachyantha
OB01G46120
I
0.714
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
0.713
Bostr.22252s0145
Boechera stricta
Bostr.22252s0145
I
0.713
PK16550.1
Cannabis sativa
PK16550.1
I
0.712
MYB109
Arabidopsis thaliana
AT3G55730
I
0.710
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.709
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
0.709
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
0.709
BRADI2G55040
Brachypodium distachyon
BRADI2G55040
I
0.708
Eucgr.K03010
Eucalyptus grandis
Eucgr.K03010
I
0.706
mgf015566m
Mimulus guttatus
mgf015566m
I
0.705
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.703
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.703
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.702
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.701
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.701
Bra034057
Brassica rapa
Bra034057
I
0.701
Bo7g117880
Brassica oleracea
Bo7g117880
I
0.701
Traes_7DL_1FA87027B
Triticum aestivum
Traes_7DL_1FA87027B
I
0.700
MLOC_63964
Hordeum vulgare
MLOC_63964
I
0.700
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.700
TRIUR3_25447
Triticum urartu
TRIUR3_25447
I
0.700
mgf023922m
Mimulus guttatus
mgf023922m
I
0.699
SapurV1A.0031s0360
Salix purpurea
SapurV1A.0031s0360
N
0.699
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.697
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.696
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.696
Si006938m.g
Setaria italica
Si006938m.g
I
0.696
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.696
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.696
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.696
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.696
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.696
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.696
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.696
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.696
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.696
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.696
OS06G0637500
Oryza sativa
OS06G0637500
I
0.696
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.695
MYB25
Arabidopsis lyrata
Al_scaffold_0004_2572
I
0.695
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.694
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.694
Bo1g144680
Brassica oleracea
Bo1g144680
I
0.690
POPTR_0008s06310
Populus trichocarpa
POPTR_0008s06310
N
0.690
Ca_27473
Cicer arietinum
Ca_27473
N
0.689
MDP0000187872
Malus domestica
MDP0000187872
I
0.688
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.688
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.687
MYB25
Arabidopsis thaliana
AT2G39880
I
0.687
GRMZM2G005112
Zea mays
GRMZM2G005112
N
0.686
TCM_033907
Theobroma cacao
TCM_033907
I
0.686
Ca_12468
Cicer arietinum
Ca_12468
I
0.686
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.685
VIT_13s0019g03200
Vitis vinifera
VIT_13s0019g03200
I
0.683
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.683
Cla022889
Citrullus lanatus
Cla022889
I
0.682
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.682
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.682
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.682
PK29071.1
Cannabis sativa
PK29071.1
I
0.682
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.682
mgf025114m
Mimulus guttatus
mgf025114m
N
0.681
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.680
Bra001323
Brassica rapa
Bra001323
I
0.680
Pm021211
Prunus mume
Pm021211
I
0.679
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.679
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.678
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.678
mgf006151m
Mimulus guttatus
mgf006151m
I
0.678
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.678
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.678
evm.TU.supercontig_56.79
Carica papaya
evm.TU.supercontig_56.79
I
0.677
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.677
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.676
evm.TU.supercontig_19.155
Carica papaya
evm.TU.supercontig_19.155
I
0.674
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.673
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
0.673
Bra005006
Brassica rapa
Bra005006
I
0.673
mgf003084m
Mimulus guttatus
mgf003084m
I
0.673
Thhalv10016794m.g
Eutrema salsugineum
Thhalv10016794m.g
I
0.672
LPERR05G10150
Leersia perrieri
LPERR05G10150
I
0.672
mgf016718m
Mimulus guttatus
mgf016718m
N
0.671
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.670
MLOC_64963
Hordeum vulgare
MLOC_64963
I
0.670
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.668
Bo4g025810
Brassica oleracea
Bo4g025810
I
0.668
Aquca_007_00776
Aquilegia coerulea
Aquca_007_00776
I
0.667
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.667
Ciclev10026107m.g
Citrus clementina
Ciclev10026107m.g
I
0.667
orange1.1g021071m.g
Citrus sinensis
orange1.1g021071m.g
I
0.667
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.666
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.666
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
0.665
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.665
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.664
BRADI2G28910
Brachypodium distachyon
BRADI2G28910
N
0.664
Cla013306
Citrullus lanatus
Cla013306
I
0.664
VIT_18s0001g09850
Vitis vinifera
VIT_18s0001g09850
I
0.662