MLOC_10556 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_10556 T274433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q948S5_TOBAC
M11074_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBA2_01
0.723 0.842
PC-MYB1
M07110_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN

NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R1_col_a
0.716 0.799
PC-MYB1
M07111_2.00
Arabidopsis thaliana
DWHNTDRCCGTTR

YAACGGYHANDWH
Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a
0.716 0.799
PK12011.1
M01279_2.00
Cannabis sativa
HAACGGHHNN

NNDDCCGTTD
PBM
Lambert et al.(2019)
pTH11423
0.693 0.842
MYB3R4
M07125_2.00
Arabidopsis thaliana
NDWWNTDRCCGTTRN

NYAACGGYHANWWHN
Dap-seq
OMalley et al.(2016)
MYB3R4_col_a
0.676 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_10556.1 Myb 50 96
MLOC_10556.1 Myb 102 148
MLOC_10556.1 Myb 154 198
MLOC_10556.3 Myb 31 75
MLOC_10556.4 Myb 50 96
MLOC_10556.4 Myb 102 148
MLOC_10556.4 Myb 154 198
MLOC_10556.5 Myb 50 96
MLOC_10556.5 Myb 102 148
MLOC_10556.5 Myb 154 198

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

Invalid Input OrderBy

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action