MLOC_3926 (Hordeum vulgare)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MLOC_3926 T274473_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.747 0.871
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.747 0.871
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.743 0.806
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.743 0.806
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.740 0.796
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.740 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_3926.1 Myb 73 119
MLOC_3926.1 Myb 125 170
MLOC_3926.2 Myb 73 119
MLOC_3926.2 Myb 125 170

Links

Other Myb/SANT family TFs
Other Hordeum vulgare TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30055.m001588 Ricinus communis 30055.m001588 N 0.000
anac061 Arabidopsis lyrata Al_scaffold_0005_1163 N 0.000
Aquca_005_00168 Aquilegia coerulea Aquca_005_00168 N 0.000
anac061 Arabidopsis thaliana AT3G44350 N 0.000
NAC090 Arabidopsis thaliana AT5G22380 N 0.000
BGIOSGA037019 Oryza indica BGIOSGA037019 N 0.000
Bo2g023870 Brassica oleracea Bo2g023870 N 0.000
Bo3g016870 Brassica oleracea Bo3g016870 N 0.000
Bo3g122200 Brassica oleracea Bo3g122200 N 0.000
Bo3g123480 Brassica oleracea Bo3g123480 N 0.000
Bo9g148540 Brassica oleracea Bo9g148540 N 0.000
Bostr.0556s0732 Boechera stricta Bostr.0556s0732 N 0.000
Bra002408 Brassica rapa Bra002408 N 0.000
Bra006624 Brassica rapa Bra006624 N 0.000
Bra019442 Brassica rapa Bra019442 N 0.000
Bra019459 Brassica rapa Bra019459 N 0.000
Bra020188 Brassica rapa Bra020188 N 0.000
Cagra.0846s0014 Capsella grandiflora Cagra.0846s0014 N 0.000
Cagra.2192s0006 Capsella grandiflora Cagra.2192s0006 N 0.000
Carubv10001788m.g Capsella rubella Carubv10001788m.g N 0.000
Carubv10017870m.g Capsella rubella Carubv10017870m.g N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
Ca_00818 Cicer arietinum Ca_00818 N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
Cla008777 Citrullus lanatus Cla008777 N 0.000
Cla018691 Citrullus lanatus Cla018691 N 0.000
Cucsa.083530 Cucumis sativus Cucsa.083530 N 0.000
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.000
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.000
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.000
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.000
Eucgr.C02446 Eucalyptus grandis Eucgr.C02446 N 0.000
Eucgr.I00583 Eucalyptus grandis Eucgr.I00583 N 0.000
Eucgr.I00587 Eucalyptus grandis Eucgr.I00587 N 0.000
Eucgr.J00505 Eucalyptus grandis Eucgr.J00505 N 0.000
Eucgr.J00508 Eucalyptus grandis Eucgr.J00508 N 0.000
Eucgr.J00509 Eucalyptus grandis Eucgr.J00509 N 0.000
Eucgr.J00511 Eucalyptus grandis Eucgr.J00511 N 0.000
Eucgr.J00512 Eucalyptus grandis Eucgr.J00512 N 0.000
Eucgr.J00513 Eucalyptus grandis Eucgr.J00513 N 0.000
Eucgr.J00514 Eucalyptus grandis Eucgr.J00514 N 0.000
Eucgr.J00516 Eucalyptus grandis Eucgr.J00516 N 0.000
Eucgr.J00517 Eucalyptus grandis Eucgr.J00517 N 0.000
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.000
Eucgr.J00519 Eucalyptus grandis Eucgr.J00519 N 0.000
Eucgr.J00520 Eucalyptus grandis Eucgr.J00520 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
F775_13455 Aegilops tauschii F775_13455 N 0.000
anac090 Arabidopsis lyrata fgenesh2_kg.6__2228__AT5G22380.1 N 0.000
gene21734-v1.0-hybrid Fragaria vesca gene21734-v1.0-hybrid N 0.000
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.000
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.000
GRMZM2G465835 Zea mays GRMZM2G465835 N 0.000
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
LPERR05G14390 Leersia perrieri LPERR05G14390 N 0.000
LPERR11G02950 Leersia perrieri LPERR11G02950 N 0.000
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.000
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
MLOC_60153 Hordeum vulgare MLOC_60153 N 0.000
MTR_2g086690 Medicago truncatula MTR_2g086690 N 0.000
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.000
OB05G26010 Oryza brachyantha OB05G26010 N 0.000
OB12G13350 Oryza brachyantha OB12G13350 N 0.000
OBART12G03440 Oryza barthii OBART12G03440 N 0.000
OGLUM12G04110 Oryza glumaepatula OGLUM12G04110 N 0.000
ONIVA12G03060 Oryza nivara ONIVA12G03060 N 0.000
OPUNC12G03240 Oryza punctata OPUNC12G03240 N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
ORGLA12G0033100 Oryza glaberrima ORGLA12G0033100 N 0.000
OS12G0156100 Oryza sativa OS12G0156100 N 0.000
Pavir.J04751 Panicum virgatum Pavir.J04751 N 0.000
Pavir.J36282 Panicum virgatum Pavir.J36282 N 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
POPTR_0001s22630 Populus trichocarpa POPTR_0001s22630 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
SapurV1A.0450s0140 Salix purpurea SapurV1A.0450s0140 N 0.000
SapurV1A.1671s0050 Salix purpurea SapurV1A.1671s0050 N 0.000
Sb09g021780 Sorghum bicolor Sb09g021780 N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
TCM_041364 Theobroma cacao TCM_041364 N 0.000
Thhalv10010503m.g Eutrema salsugineum Thhalv10010503m.g N 0.000
Thhalv10014563m.g Eutrema salsugineum Thhalv10014563m.g N 0.000
Traes_5DL_43FC1B296 Triticum aestivum Traes_5DL_43FC1B296 N 0.000
TRIUR3_33275 Triticum urartu TRIUR3_33275 N 0.000
VIT_06s0080g00780 Vitis vinifera VIT_06s0080g00780 N 0.000
VIT_18s0041g00700 Vitis vinifera VIT_18s0041g00700 N 0.000