CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MLOC_56874
(
Hordeum vulgare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MLOC_56874
T274516_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_56874.1
Myb
523
573
HRAWTLSEVLKLVDGVAQFGPGKWSEIRRLSFASYSYRTSVDLKDKWRNLI
MLOC_56874.2
Myb
523
573
HRAWTLSEVLKLVDGVAQFGPGKWSEIRRLSFASYSYRTSVDLKDKWRNLI
MLOC_56874.3
Myb
523
553
HRAWTLSEVLKLVDGVAQFGPGKWSEIRRLS
MLOC_56874.4
Myb
281
331
HRAWTLSEVLKLVDGVAQFGPGKWSEIRRLSFASYSYRTSVDLKDKWRNLI
Links
Other
Myb/SANT
family TFs
Other
Hordeum vulgare
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRAES3BF079700090CFD_g
Triticum aestivum
TRAES3BF079700090CFD_g
N
0.909
Traes_3DL_A631E1F0C
Triticum aestivum
Traes_3DL_A631E1F0C
N
0.889
Traes_3AL_B71F3F028
Triticum aestivum
Traes_3AL_B71F3F028
N
0.889
TRIUR3_15439
Triticum urartu
TRIUR3_15439
N
0.889
F775_05862
Aegilops tauschii
F775_05862
N
0.889
Pavir.Aa00316
Panicum virgatum
Pavir.Aa00316
N
0.794
BRADI3G57300
Brachypodium distachyon
BRADI3G57300
N
0.750
Pavir.J06110
Panicum virgatum
Pavir.J06110
N
0.734
Si016649m.g
Setaria italica
Si016649m.g
N
0.734
Sb04g034770
Sorghum bicolor
Sb04g034770
N
0.734
GRMZM2G049194
Zea mays
GRMZM2G049194
N
0.734
OS02G0776700
Oryza sativa
OS02G0776700
N
0.732
LPERR02G28410
Leersia perrieri
LPERR02G28410
N
0.732
OB02G41350
Oryza brachyantha
OB02G41350
N
0.732
BGIOSGA009134
Oryza indica
BGIOSGA009134
N
0.732
ORUFI02G36040
Oryza rufipogon
ORUFI02G36040
N
0.732
OGLUM02G35670
Oryza glumaepatula
OGLUM02G35670
N
0.732
ONIVA02G36570
Oryza nivara
ONIVA02G36570
N
0.732
ORGLA02G0298600
Oryza glaberrima
ORGLA02G0298600
N
0.732
OBART02G34530
Oryza barthii
OBART02G34530
N
0.732
Cucsa.360310
Cucumis sativus
Cucsa.360310
N
0.714
MTR_8g020330
Medicago truncatula
MTR_8g020330
N
0.712
Thhalv10007199m.g
Eutrema salsugineum
Thhalv10007199m.g
N
0.711
Cagra.0824s0115
Capsella grandiflora
Cagra.0824s0115
N
0.711
Carubv10012426m.g
Capsella rubella
Carubv10012426m.g
N
0.711
Ca_10028
Cicer arietinum
Ca_10028
N
0.705
Thhalv10018282m.g
Eutrema salsugineum
Thhalv10018282m.g
N
0.703
Lus10037678.g
Linum usitatissimum
Lus10037678.g
N
0.700
Lus10015664.g
Linum usitatissimum
Lus10015664.g
N
0.700
Bostr.10273s0086
Boechera stricta
Bostr.10273s0086
N
0.685
TRFL6
Arabidopsis lyrata
fgenesh2_kg.2__1530__AT1G72650.2
N
0.685
Cagra.1013s0036
Capsella grandiflora
Cagra.1013s0036
N
0.685
Carubv10019876m.g
Capsella rubella
Carubv10019876m.g
N
0.685
Bostr.7128s0357
Boechera stricta
Bostr.7128s0357
N
0.677
TRFL6
Arabidopsis thaliana
AT1G72650
N
0.676
AMTR_s00009p00103030
Amborella trichopoda
AMTR_s00009p00103030
N
0.671
TRFL3
Arabidopsis lyrata
fgenesh2_kg.1__1907__AT1G17460.1
N
0.666