CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_58915
(
Hordeum vulgare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MLOC_58915
T274527_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB106
M11040_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT3G01140_01
0.815
0.903
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.751
0.774
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.751
0.774
AtMYB93
M07020_2.00
Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD
Dap-seq
OMalley et al.(2016)
MYB93_col_a
0.705
0.774
AtMYB93
M07021_2.00
Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN
Dap-seq
OMalley et al.(2016)
MYB93_colamp_a
0.705
0.774
MYB92
M07123_2.00
Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN
Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b
0.687
0.720
MYB92
M07124_2.00
Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN
Dap-seq
OMalley et al.(2016)
MYB92_colamp_a
0.687
0.720
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.669
0.742
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_58915.4
Myb
14
61
KGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL
MLOC_58915.4
Myb
67
112
RGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHL
MLOC_58915.6
Myb
14
61
KGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL
MLOC_58915.6
Myb
67
112
RGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHL
MLOC_58915.7
Myb
14
61
KGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL
MLOC_58915.7
Myb
67
112
RGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHL
MLOC_58915.9
Myb
14
61
KGPWTTEEDEKLLAHIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYL
MLOC_58915.9
Myb
67
112
RGKFSLQEEQTIIQLHALLGNRWSAIATHLSRRTDNEIKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Hordeum vulgare
TFs
430 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy