MTR_1g013170 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_1g013170 T274677_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARR1
M02296_2.00 		Arabidopsis thaliana
NDGATHYBNN
NNVRDATCHN		 PBM
Weirauch et al.(2014)
pTH8257 		0.741 0.809
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.739 0.809
ARR10
M02702_2.00 		Arabidopsis thaliana
AGATHYKN
NMRDATCT		 SELEX
Mathelier et al.(2014)
MA0121.1 		0.678 0.681
ARR10
M11045_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ARR10_01 		0.678 0.681
ARR18
M02313_2.00 		Arabidopsis thaliana
NNNNAGATAYGNN
NNCRTATCTNNNN		 PBM
Weirauch et al.(2014)
pTH8840 		0.669 0.766
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH39870 Myb 193 243

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29848.m004559 Ricinus communis 29848.m004559 I 0.816
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.809
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.809
Traes_7DS_327FBC2CA Triticum aestivum Traes_7DS_327FBC2CA I 0.769
F775_14758 Aegilops tauschii F775_14758 I 0.769
GSMUA_Achr11G08310_001 Musa acuminata GSMUA_Achr11G08310_001 I 0.762
gene10041-v1.0-hybrid Fragaria vesca gene10041-v1.0-hybrid I 0.759
Lus10037719.g Linum usitatissimum Lus10037719.g I 0.757
Lus10016846.g Linum usitatissimum Lus10016846.g I 0.757
GSMUA_Achr9G16610_001 Musa acuminata GSMUA_Achr9G16610_001 I 0.757
Ca_09080 Cicer arietinum Ca_09080 I 0.756
Lus10041020.g Linum usitatissimum Lus10041020.g I 0.756
Lus10005340.g Linum usitatissimum Lus10005340.g I 0.756
Bostr.0556s0001 Boechera stricta Bostr.0556s0001 I 0.748
estExt_Genewise1.C_90203 Chlorella NC64A estExt_Genewise1.C_90203 I 0.744
SELMODRAFT_447635 Selaginella moellendorffii SELMODRAFT_447635 I 0.742
Bostr.28625s0008 Boechera stricta Bostr.28625s0008 I 0.741
ARR1 Arabidopsis thaliana AT3G16857 D 0.741
Cagra.5497s0018 Capsella grandiflora Cagra.5497s0018 I 0.741
Bra001643 Brassica rapa Bra001643 I 0.741
Bo3g068550 Brassica oleracea Bo3g068550 I 0.741
Carubv10013107m.g Capsella rubella Carubv10013107m.g I 0.741
Bo5g123620 Brassica oleracea Bo5g123620 I 0.741
Bra022183 Brassica rapa Bra022183 I 0.741
ARR2 Arabidopsis lyrata scaffold_702902.1 I 0.739
Bostr.30275s0051 Boechera stricta Bostr.30275s0051 I 0.739
Carubv10007581m.g Capsella rubella Carubv10007581m.g I 0.739
Thhalv10024686m.g Eutrema salsugineum Thhalv10024686m.g I 0.739
Cagra.0053s0018 Capsella grandiflora Cagra.0053s0018 I 0.739
Bra033527 Brassica rapa Bra033527 I 0.739
Bo1g055180 Brassica oleracea Bo1g055180 I 0.739
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I 0.735
OB02G42700 Oryza brachyantha OB02G42700 I 0.735
OB06G14930 Oryza brachyantha OB06G14930 I 0.735
OBART06G05360 Oryza barthii OBART06G05360 I 0.735
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I 0.735
TCM_036926 Theobroma cacao TCM_036926 I 0.735
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I 0.735
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I 0.735
Sb04g035980 Sorghum bicolor Sb04g035980 I 0.735
Si016546m.g Setaria italica Si016546m.g I 0.735
Si006013m.g Setaria italica Si006013m.g I 0.735
Sb10g005580 Sorghum bicolor Sb10g005580 I 0.735
TRIUR3_26858 Triticum urartu TRIUR3_26858 I 0.735
TRIUR3_28229 Triticum urartu TRIUR3_28229 I 0.735
OPUNC06G05150 Oryza punctata OPUNC06G05150 I 0.735
ONIVA06G06160 Oryza nivara ONIVA06G06160 I 0.735
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I 0.735
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I 0.735
RR22 Oryza sativa OS06G0183100 I 0.735
RR23 Oryza sativa OS02G0796500 I 0.735
OMERI06G06380 Oryza meridionalis OMERI06G06380 I 0.735
MLOC_11341 Hordeum vulgare MLOC_11341 I 0.735
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I 0.735
MLOC_61880 Hordeum vulgare MLOC_61880 I 0.735
Pavir.J08270 Panicum virgatum Pavir.J08270 I 0.735
Pavir.J35630 Panicum virgatum Pavir.J35630 I 0.735
RR23 Oryza indica BGIOSGA005436 I 0.735
RR22 Oryza indica BGIOSGA022430 I 0.735
GRMZM2G409974 Zea mays GRMZM2G409974 I 0.735
F775_19079 Aegilops tauschii F775_19079 I 0.735
LPERR06G04900 Leersia perrieri LPERR06G04900 I 0.735
GRMZM2G479110 Zea mays GRMZM2G479110 I 0.735
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I 0.727
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I 0.726
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I 0.726
Cucsa.271670 Cucumis sativus Cucsa.271670 I 0.726
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I 0.726
TCM_037098 Theobroma cacao TCM_037098 I 0.726
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I 0.726
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I 0.726
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I 0.726
PRUPE_ppa024819mg Prunus persica PRUPE_ppa024819mg I 0.726
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I 0.726
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I 0.726
GLYMA14G13320 Glycine max GLYMA14G13320 I 0.726
GLYMA09G14650 Glycine max GLYMA09G14650 I 0.726
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I 0.726
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I 0.726
GLYMA15G24770 Glycine max GLYMA15G24770 I 0.726
29737.m001227 Ricinus communis 29737.m001227 I 0.726
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I 0.726
Pm005710 Prunus mume Pm005710 I 0.726
GLYMA06G06730 Glycine max GLYMA06G06730 I 0.726
Cla021325 Citrullus lanatus Cla021325 I 0.726
GLYMA04G06650 Glycine max GLYMA04G06650 I 0.726
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I 0.723
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I 0.720
PDK_20s1887621g001 Phoenix dactylifera PDK_20s1887621g001 I 0.717
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I 0.717
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I 0.713
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I 0.713
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I 0.713
TRIUR3_31924 Triticum urartu TRIUR3_31924 I 0.713
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I 0.713
Si016630m.g Setaria italica Si016630m.g I 0.713
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I 0.713
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I 0.713
MLOC_3955 Hordeum vulgare MLOC_3955 I 0.713
GRMZM2G060485 Zea mays GRMZM2G060485 I 0.713
Sb04g005580 Sorghum bicolor Sb04g005580 I 0.713
F775_13501 Aegilops tauschii F775_13501 I 0.713
mgf014863m Mimulus guttatus mgf014863m I 0.711
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I 0.711
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.711
mgf001591m Mimulus guttatus mgf001591m I 0.711
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.711
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.711
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.711
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.711
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.711
Carubv10026052m.g Capsella rubella Carubv10026052m.g I 0.708
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I 0.708
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I 0.708
SapurV1A.0739s0030 Salix purpurea SapurV1A.0739s0030 I 0.707
Traes_7AS_503B57D77 Triticum aestivum Traes_7AS_503B57D77 I 0.707
SELMODRAFT_444702 Selaginella moellendorffii SELMODRAFT_444702 I 0.702
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I 0.702
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I 0.701
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I 0.701
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I 0.701
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I 0.701
MTR_1g013180 Medicago truncatula MTR_1g013180 I 0.700
MTR_3g102600 Medicago truncatula MTR_3g102600 N 0.700
GLK2 Arabidopsis thaliana AT5G44190 I 0.699
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.699
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.699
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.699
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.699
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.699
OGLUM02G06200 Oryza glumaepatula OGLUM02G06200 I 0.698
RR24 Oryza sativa OS02G0182100 I 0.698
OB02G15530 Oryza brachyantha OB02G15530 I 0.698
RR24 Oryza indica BGIOSGA007015 I 0.698
OB06G30440 Oryza brachyantha OB06G30440 I 0.698
OLONG_007266 Oryza longistaminata OLONG_007266 I 0.698
LPERR02G05460 Leersia perrieri LPERR02G05460 I 0.698
ORUFI02G06340 Oryza rufipogon ORUFI02G06340 I 0.698
ORGLA02G0057500 Oryza glaberrima ORGLA02G0057500 I 0.698
ONIVA02G07230 Oryza nivara ONIVA02G07230 I 0.698
OMERI02G07120 Oryza meridionalis OMERI02G07120 I 0.698
OBART02G06200 Oryza barthii OBART02G06200 I 0.698
GLYMA05G34523 Glycine max GLYMA05G34523 N 0.695
MTR_3g106220 Medicago truncatula MTR_3g106220 I 0.695
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.693
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.693
Pm027701 Prunus mume Pm027701 I 0.693
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.693
gw1.31.134.1 Physcomitrella patens gw1.31.134.1 I 0.691
Bra020390 Brassica rapa Bra020390 I 0.690
Bo2g028820 Brassica oleracea Bo2g028820 I 0.690
Thhalv10015296m.g Eutrema salsugineum Thhalv10015296m.g I 0.690
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.690
Thhalv10020213m.g Eutrema salsugineum Thhalv10020213m.g I 0.688
Bo1g123000 Brassica oleracea Bo1g123000 I 0.688
Si007844m.g Setaria italica Si007844m.g I 0.686
Pavir.Db00757 Panicum virgatum Pavir.Db00757 N 0.686
Pavir.J10177 Panicum virgatum Pavir.J10177 N 0.686
GSMUA_Achr3G13400_001 Musa acuminata GSMUA_Achr3G13400_001 I 0.685
Traes_7BS_17C8D2707 Triticum aestivum Traes_7BS_17C8D2707 I 0.681
GSMUA_AchrUn_randomG18820_001 Musa acuminata GSMUA_AchrUn_randomG18820_001 I 0.681
OLONG_005451 Oryza longistaminata OLONG_005451 I 0.681
Traes_7AS_1318B59D3 Triticum aestivum Traes_7AS_1318B59D3 I 0.681
Bra012743 Brassica rapa Bra012743 I 0.679
Bo7g104190 Brassica oleracea Bo7g104190 I 0.679
Thhalv10024866m.g Eutrema salsugineum Thhalv10024866m.g I 0.678
Carubv10004554m.g Capsella rubella Carubv10004554m.g I 0.678
ARR10 Arabidopsis lyrata Al_scaffold_0007_907 I 0.678
ARR10 Arabidopsis thaliana AT4G31920 D 0.678
Bostr.7867s1047 Boechera stricta Bostr.7867s1047 I 0.678
Cagra.3807s0064 Capsella grandiflora Cagra.3807s0064 I 0.678
gw1.15.242.1 Coccomyxa subellipsoidea C169 gw1.15.242.1 I 0.677
fgeneshCV_pg.C_scaffold_15000185 Chlorella vulgaris fgeneshCV_pg.C_scaffold_15000185 I 0.677
Sb05g004150 Sorghum bicolor Sb05g004150 I 0.677
BRADI3G54120 Brachypodium distachyon BRADI3G54120 I 0.675
BRADI1G47400 Brachypodium distachyon BRADI1G47400 I 0.675
Traes_6BL_790C095EE Triticum aestivum Traes_6BL_790C095EE I 0.675
Traes_6DL_D1C9CE275 Triticum aestivum Traes_6DL_D1C9CE275 I 0.675
MLOC_76165 Hordeum vulgare MLOC_76165 I 0.675
evm.TU.supercontig_127.10 Carica papaya evm.TU.supercontig_127.10 I 0.673
PGSC0003DMG400040318 Solanum tuberosum PGSC0003DMG400040318 N 0.669
ARR18 Arabidopsis thaliana AT5G58080 D 0.669
ARR18 Arabidopsis lyrata Al_scaffold_0008_2276 I 0.669
Ca_02989 Cicer arietinum Ca_02989 I 0.668
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.668
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.668
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.668
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.668
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.668
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.668
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.668
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.668
Cla022101 Citrullus lanatus Cla022101 I 0.668
29889.m003245 Ricinus communis 29889.m003245 I 0.668
PK26059.1 Cannabis sativa PK26059.1 I 0.668
Cla009424 Citrullus lanatus Cla009424 I 0.668
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.668
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.668
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.668
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.668
TCM_021300 Theobroma cacao TCM_021300 I 0.668
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.668
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.668
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.668
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.668
MDP0000224740 Malus domestica MDP0000224740 I 0.668
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.668
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.668
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.668
MDP0000290818 Malus domestica MDP0000290818 I 0.668
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.668
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.668
Gorai.001G030600 Gossypium raimondii Gorai.001G030600 I 0.666
GLYMA17G33230 Glycine max GLYMA17G33230 I 0.666
cassava37074.valid.m1 Manihot esculenta cassava37074.valid.m1 I 0.666
PK02601.1 Cannabis sativa PK02601.1 I 0.666
SapurV1A.0705s0030 Salix purpurea SapurV1A.0705s0030 I 0.666
cassava37075.valid.m1 Manihot esculenta cassava37075.valid.m1 I 0.666
PDK_20s13009423g003 Phoenix dactylifera PDK_20s13009423g003 I 0.664
LjSGA_125152.1 Lotus japonicus LjSGA_125152.1 I 0.663
GRMZM2G401835 Zea mays GRMZM2G401835 I 0.661
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.661