CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g086530
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_1g086530
T274711_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.677
0.806
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES61610
Myb
35
82
KGPWTEEEDTILMNYVAVHGDGHWNSVARCSGLKRTGKSCRLRWLNYL
AES61610
Myb
88
133
RGNITLQEQVLILDLHSRWGNRWSKIAEQLPGRTDNEIKNYWRTRV
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
178 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_03535
Cicer arietinum
Ca_03535
I
0.819
GLYMA03G38040
Glycine max
GLYMA03G38040
I
0.785
GLYMA19G40650
Glycine max
GLYMA19G40650
I
0.785
Cla017610
Citrullus lanatus
Cla017610
I
0.779
GLYMA10G01330
Glycine max
GLYMA10G01330
I
0.779
Cucsa.300720
Cucumis sativus
Cucsa.300720
I
0.779
Ca_03536
Cicer arietinum
Ca_03536
I
0.766
30076.m004607
Ricinus communis
30076.m004607
I
0.765
Cucsa.252400
Cucumis sativus
Cucsa.252400
I
0.762
GLYMA02G01300
Glycine max
GLYMA02G01300
I
0.762
Gorai.004G146000
Gossypium raimondii
Gorai.004G146000
I
0.757
MTR_1g086510
Medicago truncatula
MTR_1g086510
I
0.757
GLYMA03G38070
Glycine max
GLYMA03G38070
I
0.750
POPTR_0002s19250
Populus trichocarpa
POPTR_0002s19250
I
0.743
cassava39393.m1
Manihot esculenta
cassava39393.m1
I
0.739
Cla022143
Citrullus lanatus
Cla022143
I
0.738
SapurV1A.0294s0070
Salix purpurea
SapurV1A.0294s0070
I
0.737
SapurV1A.0014s0140
Salix purpurea
SapurV1A.0014s0140
I
0.735
evm.TU.supercontig_145.21
Carica papaya
evm.TU.supercontig_145.21
I
0.731
cassava33046.m1
Manihot esculenta
cassava33046.m1
I
0.730
GLYMA19G40670
Glycine max
GLYMA19G40670
I
0.728
Lus10009996.g
Linum usitatissimum
Lus10009996.g
I
0.727
GSMUA_Achr5G21090_001
Musa acuminata
GSMUA_Achr5G21090_001
I
0.722
TCM_004878
Theobroma cacao
TCM_004878
I
0.719
Cucsa.128620
Cucumis sativus
Cucsa.128620
I
0.706
Bo4g198510
Brassica oleracea
Bo4g198510
I
0.705
Thhalv10001584m.g
Eutrema salsugineum
Thhalv10001584m.g
I
0.705
ATMYB2
Arabidopsis thaliana
AT2G47190
I
0.705
Bo00954s080
Brassica oleracea
Bo00954s080
I
0.705
ATMYB2
Arabidopsis lyrata
fgenesh2_kg.4__2955__AT2G47190.1
I
0.705
Bostr.25993s0044
Boechera stricta
Bostr.25993s0044
I
0.705
Cagra.6400s0003
Capsella grandiflora
Cagra.6400s0003
I
0.705
Bra021389
Brassica rapa
Bra021389
I
0.705
Carubv10023831m.g
Capsella rubella
Carubv10023831m.g
I
0.705
Bra004473
Brassica rapa
Bra004473
I
0.705
ATMYB2
Vitis vinifera
VIT_07s0005g01950
I
0.704
Gorai.007G121000
Gossypium raimondii
Gorai.007G121000
I
0.703
F775_08129
Aegilops tauschii
F775_08129
I
0.703
Traes_5BS_95A52A87F
Triticum aestivum
Traes_5BS_95A52A87F
I
0.703
Lus10038062.g
Linum usitatissimum
Lus10038062.g
I
0.703
MLOC_6821
Hordeum vulgare
MLOC_6821
I
0.703
Traes_5DS_DE2C70E4C
Triticum aestivum
Traes_5DS_DE2C70E4C
I
0.703
GSMUA_Achr4G19990_001
Musa acuminata
GSMUA_Achr4G19990_001
I
0.703
gene03712-v1.0-hybrid
Fragaria vesca
gene03712-v1.0-hybrid
I
0.701
GSMUA_Achr9G16640_001
Musa acuminata
GSMUA_Achr9G16640_001
I
0.700
Solyc12g099130.1
Solanum lycopersicum
Solyc12g099130.1
I
0.700
PK10896.1
Cannabis sativa
PK10896.1
I
0.697
MDP0000823458
Malus domestica
MDP0000823458
I
0.697
Cla015409
Citrullus lanatus
Cla015409
I
0.695
TCM_021433
Theobroma cacao
TCM_021433
I
0.693
Si030584m.g
Setaria italica
Si030584m.g
I
0.692
GLYMA10G01340
Glycine max
GLYMA10G01340
I
0.692
GSMUA_Achr11G20830_001
Musa acuminata
GSMUA_Achr11G20830_001
I
0.692
Cla019255
Citrullus lanatus
Cla019255
I
0.692
GSMUA_Achr3G08370_001
Musa acuminata
GSMUA_Achr3G08370_001
I
0.691
Cucsa.365190
Cucumis sativus
Cucsa.365190
I
0.690
Pm012912
Prunus mume
Pm012912
I
0.690
PRUPE_ppa015973mg
Prunus persica
PRUPE_ppa015973mg
I
0.690
Gorai.004G145800
Gossypium raimondii
Gorai.004G145800
I
0.689
Sb09g002680
Sorghum bicolor
Sb09g002680
I
0.688
Gorai.006G060300
Gossypium raimondii
Gorai.006G060300
I
0.688
MDP0000274300
Malus domestica
MDP0000274300
I
0.687
PGSC0003DMG400008761
Solanum tuberosum
PGSC0003DMG400008761
I
0.687
gene05018-v1.0-hybrid
Fragaria vesca
gene05018-v1.0-hybrid
I
0.687
Solyc01g057910.2
Solanum lycopersicum
Solyc01g057910.2
I
0.687
PRUPE_ppa025672mg
Prunus persica
PRUPE_ppa025672mg
I
0.687
PGSC0003DMG400004612
Solanum tuberosum
PGSC0003DMG400004612
I
0.685
Eucgr.B03985
Eucalyptus grandis
Eucgr.B03985
I
0.684
mgf015990m
Mimulus guttatus
mgf015990m
I
0.684
evm.TU.contig_30289.2
Carica papaya
evm.TU.contig_30289.2
I
0.684
Aquca_003_00440
Aquilegia coerulea
Aquca_003_00440
I
0.684
Bra010022
Brassica rapa
Bra010022
I
0.684
GSMUA_Achr9G07000_001
Musa acuminata
GSMUA_Achr9G07000_001
I
0.684
MYB78
Arabidopsis lyrata
fgenesh2_kg.8__837__AT5G49620.1
I
0.684
Bostr.15774s0093
Boechera stricta
Bostr.15774s0093
I
0.684
VIT_05s0077g00500
Vitis vinifera
VIT_05s0077g00500
I
0.684
Cagra.3474s0016
Capsella grandiflora
Cagra.3474s0016
I
0.684
Bra010021
Brassica rapa
Bra010021
I
0.684
Carubv10026871m.g
Capsella rubella
Carubv10026871m.g
I
0.684
Gorai.005G068900
Gossypium raimondii
Gorai.005G068900
I
0.684
PK21537.1
Cannabis sativa
PK21537.1
I
0.684
Gorai.011G203900
Gossypium raimondii
Gorai.011G203900
I
0.684
Bo7g092890
Brassica oleracea
Bo7g092890
I
0.684
Thhalv10004588m.g
Eutrema salsugineum
Thhalv10004588m.g
I
0.684
MDP0000934638
Malus domestica
MDP0000934638
I
0.683
GRMZM2G160840
Zea mays
GRMZM2G160840
I
0.683
GSMUA_Achr1G27270_001
Musa acuminata
GSMUA_Achr1G27270_001
I
0.682
GLYMA07G36430
Glycine max
GLYMA07G36430
I
0.682
PGSC0003DMG401004611
Solanum tuberosum
PGSC0003DMG401004611
I
0.682
PK13281.1
Cannabis sativa
PK13281.1
I
0.681
GSMUA_Achr8G10800_001
Musa acuminata
GSMUA_Achr8G10800_001
I
0.680
Eucgr.K03562
Eucalyptus grandis
Eucgr.K03562
I
0.680
Cucsa.213510
Cucumis sativus
Cucsa.213510
I
0.680
Bo2g151810
Brassica oleracea
Bo2g151810
I
0.679
mgf013798m
Mimulus guttatus
mgf013798m
I
0.679
Bra020624
Brassica rapa
Bra020624
I
0.679
OB05G33720
Oryza brachyantha
OB05G33720
I
0.679
Bo5g143460
Brassica oleracea
Bo5g143460
I
0.677
Carubv10014195m.g
Capsella rubella
Carubv10014195m.g
I
0.677
MYB108
Arabidopsis thaliana
AT3G06490
D
0.677
MYB108
Arabidopsis lyrata
fgenesh2_kg.3__656__AT3G06490.1
I
0.677
Bra029582
Brassica rapa
Bra029582
I
0.677
GSMUA_AchrUn_randomG08600_001
Musa acuminata
GSMUA_AchrUn_randomG08600_001
I
0.677
Bostr.2570s0008
Boechera stricta
Bostr.2570s0008
I
0.677
Cagra.9553s0006
Capsella grandiflora
Cagra.9553s0006
I
0.677
GLYMA15G14620
Glycine max
GLYMA15G14620
I
0.675
ORUFI01G01910
Oryza rufipogon
ORUFI01G01910
I
0.675
MTR_2g033170
Medicago truncatula
MTR_2g033170
I
0.675
GLYMA09G03690
Glycine max
GLYMA09G03690
I
0.675
OS01G0128000
Oryza sativa
OS01G0128000
I
0.675
Ca_08069
Cicer arietinum
Ca_08069
I
0.675
Aquca_002_00135
Aquilegia coerulea
Aquca_002_00135
I
0.675
Bo1g147890
Brassica oleracea
Bo1g147890
I
0.674
Bra001202
Brassica rapa
Bra001202
I
0.674
POPTR_0014s11230
Populus trichocarpa
POPTR_0014s11230
I
0.674
GSMUA_Achr6G27290_001
Musa acuminata
GSMUA_Achr6G27290_001
I
0.674
Bra040274
Brassica rapa
Bra040274
I
0.674
Gorai.008G158000
Gossypium raimondii
Gorai.008G158000
I
0.673
BRADI2G38560
Brachypodium distachyon
BRADI2G38560
I
0.672
Solyc12g099120.1
Solanum lycopersicum
Solyc12g099120.1
I
0.672
Bo5g043390
Brassica oleracea
Bo5g043390
I
0.672
Pm008425
Prunus mume
Pm008425
I
0.672
Sb02g043420
Sorghum bicolor
Sb02g043420
I
0.672
Gorai.006G080800
Gossypium raimondii
Gorai.006G080800
I
0.671
GLYMA17G04171
Glycine max
GLYMA17G04171
I
0.671
Pavir.J39490
Panicum virgatum
Pavir.J39490
I
0.669
Sb01g037110
Sorghum bicolor
Sb01g037110
I
0.669
Si035722m.g
Setaria italica
Si035722m.g
I
0.669
Pavir.J28445
Panicum virgatum
Pavir.J28445
I
0.669
orange1.1g020197m.g
Citrus sinensis
orange1.1g020197m.g
I
0.669
TCM_005112
Theobroma cacao
TCM_005112
I
0.668
GSMUA_Achr3G12730_001
Musa acuminata
GSMUA_Achr3G12730_001
I
0.668
GRMZM2G001824
Zea mays
GRMZM2G001824
I
0.667
ORGLA07G0213800
Oryza glaberrima
ORGLA07G0213800
I
0.667
BGIOSGA026430
Oryza indica
BGIOSGA026430
I
0.667
OB07G32480
Oryza brachyantha
OB07G32480
I
0.667
OS07G0688200
Oryza sativa
OS07G0688200
I
0.667
AMTR_s00003p00219710
Amborella trichopoda
AMTR_s00003p00219710
I
0.667
OPUNC07G25360
Oryza punctata
OPUNC07G25360
I
0.667
OBART07G26990
Oryza barthii
OBART07G26990
I
0.667
OGLUM07G26960
Oryza glumaepatula
OGLUM07G26960
I
0.667
OMERI07G23590
Oryza meridionalis
OMERI07G23590
I
0.667
ONIVA07G26740
Oryza nivara
ONIVA07G26740
I
0.667
ORUFI07G27930
Oryza rufipogon
ORUFI07G27930
I
0.667
PRUPE_ppa009143mg
Prunus persica
PRUPE_ppa009143mg
I
0.666
Pm029082
Prunus mume
Pm029082
I
0.666
orange1.1g043269m.g
Citrus sinensis
orange1.1g043269m.g
I
0.666
Ciclev10021479m.g
Citrus clementina
Ciclev10021479m.g
I
0.666
Thhalv10004857m.g
Eutrema salsugineum
Thhalv10004857m.g
I
0.665
MYB21
Arabidopsis thaliana
AT3G27810
I
0.665
AtMYB78
Arabidopsis thaliana
AT5G49620
I
0.665
Bra039067
Brassica rapa
Bra039067
I
0.665
Cagra.11216s0001
Capsella grandiflora
Cagra.11216s0001
I
0.665
Bra025300
Brassica rapa
Bra025300
I
0.665
Bo7g085930
Brassica oleracea
Bo7g085930
I
0.665
ATMYB21
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5000445
I
0.665
GSMUA_Achr11G16130_001
Musa acuminata
GSMUA_Achr11G16130_001
I
0.665
Carubv10018700m.g
Capsella rubella
Carubv10018700m.g
I
0.665
Bostr.0556s0458
Boechera stricta
Bostr.0556s0458
I
0.665
Eucgr.H00907
Eucalyptus grandis
Eucgr.H00907
I
0.665
Bo9g008370
Brassica oleracea
Bo9g008370
I
0.665
GSMUA_Achr8G29910_001
Musa acuminata
GSMUA_Achr8G29910_001
I
0.664
GRMZM2G134279
Zea mays
GRMZM2G134279
I
0.663
Lus10037818.g
Linum usitatissimum
Lus10037818.g
I
0.663
Lus10009037.g
Linum usitatissimum
Lus10009037.g
I
0.663
Lus10017096.g
Linum usitatissimum
Lus10017096.g
I
0.663
Lus10032129.g
Linum usitatissimum
Lus10032129.g
I
0.663
Lus10014557.g
Linum usitatissimum
Lus10014557.g
I
0.663
OPUNC05G02190
Oryza punctata
OPUNC05G02190
I
0.662
ORUFI05G02420
Oryza rufipogon
ORUFI05G02420
I
0.662
ORGLA05G0022200
Oryza glaberrima
ORGLA05G0022200
I
0.662
OB05G12230
Oryza brachyantha
OB05G12230
I
0.662
BGIOSGA018863
Oryza indica
BGIOSGA018863
I
0.662
Pavir.Bb03718
Panicum virgatum
Pavir.Bb03718
I
0.662
OGLUM05G02350
Oryza glumaepatula
OGLUM05G02350
I
0.662
ONIVA05G02220
Oryza nivara
ONIVA05G02220
I
0.662
GSMUA_AchrUn_randomG27010_001
Musa acuminata
GSMUA_AchrUn_randomG27010_001
I
0.661
MDP0000812154
Malus domestica
MDP0000812154
I
0.661