MTR_2g031870 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_2g031870 T274730_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TRB1
M01070_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Sullivan et al.(2014)
pTH7117
0.758 0.872
PK06103.1
M02348_2.00
Cannabis sativa
TGCCCTAG

CTAGGGCA
PBM
Weirauch et al.(2014)
pTH9649
0.732 0.851
TRB2
M02314_2.00
Arabidopsis thaliana
WRMCCTAR

YTAGGKYW
PBM
Weirauch et al.(2014)
pTH7094
0.711 0.787
TRB2
M01083_2.00
Arabidopsis thaliana
HRMCCTAR

YTAGGKYD
PBM
Sullivan et al.(2014)
pTH7260
0.711 0.787
TRB2
M07157_2.00
Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN

NDDWTTAGGGYWWNDDDDD
Dap-seq
OMalley et al.(2016)
TBP3_col_a
0.711 0.787
TRB2
M07158_2.00
Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH

DRDTTAGGGYTWNDDDHBD
Dap-seq
OMalley et al.(2016)
TBP3_colamp_a
0.711 0.787
OS01G0708000
M02326_2.00
Oryza sativa
WRMCCTAVNN

NNBTAGGKYW
PBM
Weirauch et al.(2014)
pTH8716
0.699 0.787
AT1G72740
M07033_2.00
Arabidopsis thaliana
HMNAAACCCTAAWYY

RRWTTAGGGTTTNKD
Dap-seq
OMalley et al.(2016)
AT1G72740_col_a
0.666 0.723
AT1G72740
M07034_2.00
Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN

NNNDNNNDRDTTAGGGTTWND
Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a
0.666 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH37110 Myb 5 57
KEH37111 Myb 5 40

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

221 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA09G03390 Glycine max GLYMA09G03390 I 0.857
Ca_08043 Cicer arietinum Ca_08043 I 0.857
GLYMA15G14320 Glycine max GLYMA15G14320 I 0.857
MTR_0095s0040 Medicago truncatula MTR_0095s0040 I 0.835
MTR_8g494240 Medicago truncatula MTR_8g494240 I 0.815
Solyc02g064630.2 Solanum lycopersicum Solyc02g064630.2 I 0.812
PGSC0003DMG402003328 Solanum tuberosum PGSC0003DMG402003328 I 0.812
mgf004823m Mimulus guttatus mgf004823m I 0.810
GSMUA_Achr7G01090_001 Musa acuminata GSMUA_Achr7G01090_001 I 0.787
GSMUA_Achr6G31260_001 Musa acuminata GSMUA_Achr6G31260_001 I 0.786
GSMUA_Achr6G30000_001 Musa acuminata GSMUA_Achr6G30000_001 I 0.779
gene25445-v1.0-hybrid Fragaria vesca gene25445-v1.0-hybrid I 0.767
Bra018818 Brassica rapa Bra018818 I 0.758
Bostr.26675s0174 Boechera stricta Bostr.26675s0174 I 0.758
Cagra.2826s0004 Capsella grandiflora Cagra.2826s0004 I 0.758
TRB1 Arabidopsis lyrata fgenesh2_kg.1__4077__AT1G49950.2 I 0.758
Thhalv10011686m.g Eutrema salsugineum Thhalv10011686m.g I 0.758
TRB1 Arabidopsis thaliana AT1G49950 D 0.758
Bo6g018740 Brassica oleracea Bo6g018740 I 0.758
Carubv10009836m.g Capsella rubella Carubv10009836m.g I 0.758
evm.TU.supercontig_25.81 Carica papaya evm.TU.supercontig_25.81 I 0.744
MTR_8g092810 Medicago truncatula MTR_8g092810 I 0.742
Eucgr.I01053 Eucalyptus grandis Eucgr.I01053 I 0.740
Ciclev10028926m.g Citrus clementina Ciclev10028926m.g I 0.740
TRB1 Vitis vinifera VIT_03s0091g01030 I 0.740
SapurV1A.0005s0260 Salix purpurea SapurV1A.0005s0260 I 0.740
TCM_007242 Theobroma cacao TCM_007242 I 0.740
orange1.1g022048m.g Citrus sinensis orange1.1g022048m.g I 0.740
Lus10014653.g Linum usitatissimum Lus10014653.g I 0.740
29812.m000204 Ricinus communis 29812.m000204 I 0.740
Lus10033775.g Linum usitatissimum Lus10033775.g I 0.740
POPTR_0001s30000 Populus trichocarpa POPTR_0001s30000 I 0.740
Gorai.005G230800 Gossypium raimondii Gorai.005G230800 I 0.740
POPTR_0009s09020 Populus trichocarpa POPTR_0009s09020 I 0.740
Cla006547 Citrullus lanatus Cla006547 I 0.740
Cucsa.298390 Cucumis sativus Cucsa.298390 I 0.740
PK19870.1 Cannabis sativa PK19870.1 I 0.740
Aquca_004_00181 Aquilegia coerulea Aquca_004_00181 I 0.740
SapurV1A.0019s0460 Salix purpurea SapurV1A.0019s0460 I 0.740
PDK_20s1467521g002 Phoenix dactylifera PDK_20s1467521g002 I 0.740
MTR_1g041765 Medicago truncatula MTR_1g041765 I 0.736
Genemark1.2391_g Coccomyxa subellipsoidea C169 Genemark1.2391_g N 0.734
PDK_20s1413011g001 Phoenix dactylifera PDK_20s1413011g001 I 0.734
Bra025967 Brassica rapa Bra025967 I 0.733
Bo5g023860 Brassica oleracea Bo5g023860 I 0.733
cassava7508.valid.m1 Manihot esculenta cassava7508.valid.m1 I 0.732
MDP0000239354 Malus domestica MDP0000239354 I 0.732
MDP0000234807 Malus domestica MDP0000234807 I 0.732
Pm002374 Prunus mume Pm002374 I 0.732
PRUPE_ppa009220mg Prunus persica PRUPE_ppa009220mg I 0.732
VIT_00s1311g00020 Vitis vinifera VIT_00s1311g00020 I 0.732
VIT_07s0151g00480 Vitis vinifera VIT_07s0151g00480 I 0.732
PK06103.1 Cannabis sativa PK06103.1 D 0.732
POPTR_0007s14920 Populus trichocarpa POPTR_0007s14920 I 0.732
29661.m000926 Ricinus communis 29661.m000926 I 0.732
cassava19326.valid.m1 Manihot esculenta cassava19326.valid.m1 I 0.729
PGSC0003DMG401025742 Solanum tuberosum PGSC0003DMG401025742 I 0.729
Pm021139 Prunus mume Pm021139 I 0.729
PRUPE_ppa011492mg Prunus persica PRUPE_ppa011492mg I 0.729
ONIVA01G23780 Oryza nivara ONIVA01G23780 I 0.728
LPERR01G18090 Leersia perrieri LPERR01G18090 I 0.728
BGIOSGA003871 Oryza indica BGIOSGA003871 I 0.728
OMERI01G19510 Oryza meridionalis OMERI01G19510 I 0.728
OLONG_011068 Oryza longistaminata OLONG_011068 I 0.728
OPUNC01G21220 Oryza punctata OPUNC01G21220 I 0.728
OBART01G21150 Oryza barthii OBART01G21150 I 0.728
OB01G30760 Oryza brachyantha OB01G30760 I 0.728
OS01G0589300 Oryza sativa OS01G0589300 I 0.728
OMERI01G19490 Oryza meridionalis OMERI01G19490 I 0.728
ORGLA01G0168300 Oryza glaberrima ORGLA01G0168300 I 0.728
ORUFI01G23880 Oryza rufipogon ORUFI01G23880 I 0.728
Bra016598 Brassica rapa Bra016598 I 0.722
gene05764-v1.0-hybrid Fragaria vesca gene05764-v1.0-hybrid I 0.722
Bo8g067280 Brassica oleracea Bo8g067280 I 0.722
TRB3 Arabidopsis lyrata fgenesh2_kg.5__1337__AT3G49850.1 I 0.721
Ca_02232 Cicer arietinum Ca_02232 I 0.721
orange1.1g020653m.g Citrus sinensis orange1.1g020653m.g I 0.721
Cla014248 Citrullus lanatus Cla014248 I 0.721
LjT25P15.150.nd Lotus japonicus LjT25P15.150.nd I 0.721
Bostr.0568s0184 Boechera stricta Bostr.0568s0184 I 0.721
Ciclev10026089m.g Citrus clementina Ciclev10026089m.g I 0.721
MTR_4g097130 Medicago truncatula MTR_4g097130 I 0.721
cassava37744.valid.m1 Manihot esculenta cassava37744.valid.m1 I 0.721
Ca_09355 Cicer arietinum Ca_09355 I 0.721
Bostr.6864s0256 Boechera stricta Bostr.6864s0256 I 0.721
Thhalv10004691m.g Eutrema salsugineum Thhalv10004691m.g I 0.721
TCM_000807 Theobroma cacao TCM_000807 I 0.721
GLYMA17G17370 Glycine max GLYMA17G17370 I 0.721
Carubv10017722m.g Capsella rubella Carubv10017722m.g I 0.721
Gorai.007G224200 Gossypium raimondii Gorai.007G224200 I 0.721
Cagra.0342s0046 Capsella grandiflora Cagra.0342s0046 I 0.721
Cagra.4491s0006 Capsella grandiflora Cagra.4491s0006 I 0.721
Thhalv10010562m.g Eutrema salsugineum Thhalv10010562m.g I 0.721
Cucsa.103240 Cucumis sativus Cucsa.103240 I 0.721
GLYMA05G22500 Glycine max GLYMA05G22500 I 0.721
Gorai.003G030800 Gossypium raimondii Gorai.003G030800 I 0.721
Bra029978 Brassica rapa Bra029978 I 0.721
GLYMA01G40220 Glycine max GLYMA01G40220 I 0.721
Carubv10026874m.g Capsella rubella Carubv10026874m.g I 0.721
GLYMA11G05070 Glycine max GLYMA11G05070 I 0.721
Bo1g081300 Brassica oleracea Bo1g081300 I 0.721
GSMUA_Achr2G13040_001 Musa acuminata GSMUA_Achr2G13040_001 I 0.719
Solyc11g044320.1 Solanum lycopersicum Solyc11g044320.1 I 0.718
PGSC0003DMG400023131 Solanum tuberosum PGSC0003DMG400023131 I 0.718
Bra039650 Brassica rapa Bra039650 I 0.713
AMTR_s00036p00166880 Amborella trichopoda AMTR_s00036p00166880 I 0.713
Bo5g077530 Brassica oleracea Bo5g077530 I 0.713
OSTLU_27049 Ostreococcus lucimarinus OSTLU_27049 I 0.713
Bo8g104830 Brassica oleracea Bo8g104830 I 0.712
TRB2 Arabidopsis thaliana AT5G67580 D 0.711
TRB2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_8002157 I 0.711
Eucgr.H02312 Eucalyptus grandis Eucgr.H02312 I 0.711
Traes_5BS_EB206B8BC Triticum aestivum Traes_5BS_EB206B8BC I 0.707
Traes_5AS_8756ECB5A Triticum aestivum Traes_5AS_8756ECB5A I 0.707
TRIUR3_10613 Triticum urartu TRIUR3_10613 I 0.707
Traes_5DS_3EE830A43 Triticum aestivum Traes_5DS_3EE830A43 I 0.707
MLOC_10278 Hordeum vulgare MLOC_10278 I 0.707
BRADI4G01770 Brachypodium distachyon BRADI4G01770 I 0.707
mgf007122m Mimulus guttatus mgf007122m I 0.707
Aquca_060_00026 Aquilegia coerulea Aquca_060_00026 I 0.706
SELMODRAFT_49312 Selaginella moellendorffii SELMODRAFT_49312 I 0.703
SELMODRAFT_443975 Selaginella moellendorffii SELMODRAFT_443975 I 0.703
mgf000125m Mimulus guttatus mgf000125m I 0.701
SELMODRAFT_426759 Selaginella moellendorffii SELMODRAFT_426759 I 0.701
SELMODRAFT_413266 Selaginella moellendorffii SELMODRAFT_413266 I 0.701
mgf009594m Mimulus guttatus mgf009594m I 0.701
mgf010975m Mimulus guttatus mgf010975m I 0.701
Bra030992 Brassica rapa Bra030992 I 0.700
ONIVA01G32190 Oryza nivara ONIVA01G32190 I 0.699
OB01G37330 Oryza brachyantha OB01G37330 I 0.699
LPERR01G24270 Leersia perrieri LPERR01G24270 I 0.699
OBART01G28260 Oryza barthii OBART01G28260 I 0.699
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I 0.699
TRAES3BF075800120CFD_g Triticum aestivum TRAES3BF075800120CFD_g I 0.699
Pavir.Ea02570 Panicum virgatum Pavir.Ea02570 I 0.699
Pavir.Eb02802 Panicum virgatum Pavir.Eb02802 I 0.699
GRMZM2G095239 Zea mays GRMZM2G095239 N 0.699
BRADI2G47820 Brachypodium distachyon BRADI2G47820 I 0.699
GRMZM2G108424 Zea mays GRMZM2G108424 I 0.699
Pavir.Ib04118 Panicum virgatum Pavir.Ib04118 N 0.699
Pavir.Ia01166 Panicum virgatum Pavir.Ia01166 N 0.699
OLONG_008666 Oryza longistaminata OLONG_008666 I 0.699
OMERI05G07460 Oryza meridionalis OMERI05G07460 I 0.699
Sb03g032530 Sorghum bicolor Sb03g032530 I 0.699
Si002467m.g Setaria italica Si002467m.g I 0.699
Si036471m.g Setaria italica Si036471m.g N 0.699
Traes_3AL_12B53AB09 Triticum aestivum Traes_3AL_12B53AB09 I 0.699
Sb01g013670 Sorghum bicolor Sb01g013670 N 0.699
OS01G0708000 Oryza sativa OS01G0708000 D 0.699
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I 0.699
BGIOSGA004300 Oryza indica BGIOSGA004300 I 0.699
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I 0.699
OPUNC01G28080 Oryza punctata OPUNC01G28080 I 0.699
AMTR_s00007p00193000 Amborella trichopoda AMTR_s00007p00193000 I 0.695
SapurV1A.1368s0050 Salix purpurea SapurV1A.1368s0050 I 0.693
Lus10019260.g Linum usitatissimum Lus10019260.g I 0.693
Lus10011546.g Linum usitatissimum Lus10011546.g I 0.693
SapurV1A.0235s0100 Salix purpurea SapurV1A.0235s0100 I 0.693
SELMODRAFT_49297 Selaginella moellendorffii SELMODRAFT_49297 I 0.693
POPTR_0014s01010 Populus trichocarpa POPTR_0014s01010 I 0.693
SELMODRAFT_49296 Selaginella moellendorffii SELMODRAFT_49296 I 0.693
Pavir.Ea02064 Panicum virgatum Pavir.Ea02064 I 0.689
Si002403m.g Setaria italica Si002403m.g I 0.689
Pavir.J27218 Panicum virgatum Pavir.J27218 I 0.689
BRADI2G42240 Brachypodium distachyon BRADI2G42240 I 0.689
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.688
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.688
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.688
ORGLA12G0159400 Oryza glaberrima ORGLA12G0159400 I 0.686
OS12G0613300 Oryza sativa OS12G0613300 I 0.686
ORUFI12G20880 Oryza rufipogon ORUFI12G20880 I 0.686
OGLUM12G20330 Oryza glumaepatula OGLUM12G20330 I 0.686
BGIOSGA035841 Oryza indica BGIOSGA035841 I 0.686
OB12G25520 Oryza brachyantha OB12G25520 I 0.686
OLONG_008332 Oryza longistaminata OLONG_008332 I 0.686
ONIVA12G17630 Oryza nivara ONIVA12G17630 I 0.686
OPUNC12G16890 Oryza punctata OPUNC12G16890 I 0.686
OBART12G18680 Oryza barthii OBART12G18680 I 0.686
EuGene.1300010252 Ostreococcus RCC809 EuGene.1300010252 I 0.682
MTR_5g015340 Medicago truncatula MTR_5g015340 I 0.681
Bra037839 Brassica rapa Bra037839 I 0.681
Bra024438 Brassica rapa Bra024438 I 0.681
EuGene.0000030935 Micromonas pusilla EuGene.0000030935 I 0.681
Bra037837 Brassica rapa Bra037837 I 0.681
Bo9g019040 Brassica oleracea Bo9g019040 I 0.681
TRB3 Arabidopsis thaliana AT3G49850 I 0.681
Bo3g096520 Brassica oleracea Bo3g096520 I 0.681
gene07496-v1.0-hybrid Fragaria vesca gene07496-v1.0-hybrid I 0.680
mgf011386m Mimulus guttatus mgf011386m I 0.680
GRMZM2G087817 Zea mays GRMZM2G087817 I 0.679
Sb03g026470 Sorghum bicolor Sb03g026470 I 0.679
GRMZM2G136887 Zea mays GRMZM2G136887 I 0.679
Traes_3AL_CF481F6AC Triticum aestivum Traes_3AL_CF481F6AC I 0.679
TRAES3BF118300070CFD_g Triticum aestivum TRAES3BF118300070CFD_g I 0.679
TRIUR3_08672 Triticum urartu TRIUR3_08672 I 0.679
Pavir.J17249 Panicum virgatum Pavir.J17249 N 0.677
MLOC_34636 Hordeum vulgare MLOC_34636 N 0.677
Pavir.J13527 Panicum virgatum Pavir.J13527 N 0.677
Si002375m.g Setaria italica Si002375m.g N 0.677
Pavir.Eb00490 Panicum virgatum Pavir.Eb00490 N 0.677
chr3.LjT02L14.30.nd Lotus japonicus chr3.LjT02L14.30.nd I 0.676
LjSGA_016825.2 Lotus japonicus LjSGA_016825.2 I 0.676
Eucgr.J02841 Eucalyptus grandis Eucgr.J02841 I 0.674
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.674
EuGene.0500010080 Micromonas sp RCC299 EuGene.0500010080 I 0.673
GSMUA_Achr4G09130_001 Musa acuminata GSMUA_Achr4G09130_001 I 0.672
GSMUA_Achr4G08670_001 Musa acuminata GSMUA_Achr4G08670_001 I 0.672
GSMUA_Achr8G24960_001 Musa acuminata GSMUA_Achr8G24960_001 I 0.672
PDK_20s1888511g002 Phoenix dactylifera PDK_20s1888511g002 I 0.672
LPERR03G22590 Leersia perrieri LPERR03G22590 N 0.667
LjSGA_029815.1 Lotus japonicus LjSGA_029815.1 I 0.667
chr2.LjT13P17.300.nd Lotus japonicus chr2.LjT13P17.300.nd I 0.667
Thhalv10018950m.g Eutrema salsugineum Thhalv10018950m.g I 0.666
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.666
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.666
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.666
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.666
gw1.176.27.1 Physcomitrella patens gw1.176.27.1 I 0.664
gw1.1.287.1 Physcomitrella patens gw1.1.287.1 I 0.664
OMERI12G14000 Oryza meridionalis OMERI12G14000 I 0.664
cassava43824.valid.m1 Manihot esculenta cassava43824.valid.m1 I 0.664