MTR_5g082910 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g082910 T274883_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN

NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.692 0.731
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH

DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.689 0.731
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN

NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.673 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES99620 Myb 19 65
AES99620 Myb 71 116

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA14G06320 Glycine max GLYMA14G06320 I 0.803
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I 0.792
Ca_12468 Cicer arietinum Ca_12468 I 0.790
GLYMA02G43280 Glycine max GLYMA02G43280 I 0.784
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I 0.778
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I 0.778
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I 0.765
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I 0.759
Lus10028250.g Linum usitatissimum Lus10028250.g I 0.755
Lus10040239.g Linum usitatissimum Lus10040239.g I 0.755
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I 0.754
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I 0.751
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I 0.750
orange1.1g012494m.g Citrus sinensis orange1.1g012494m.g I 0.743
Ciclev10031463m.g Citrus clementina Ciclev10031463m.g I 0.743
MDP0000298689 Malus domestica MDP0000298689 I 0.739
mgf020432m Mimulus guttatus mgf020432m I 0.735
Cucsa.368410 Cucumis sativus Cucsa.368410 I 0.735
Cla004431 Citrullus lanatus Cla004431 I 0.733
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I 0.730
orange1.1g017566m.g Citrus sinensis orange1.1g017566m.g I 0.730
Ciclev10012003m.g Citrus clementina Ciclev10012003m.g I 0.730
cassava7558.valid.m1 Manihot esculenta cassava7558.valid.m1 I 0.728
27798.m000612 Ricinus communis 27798.m000612 I 0.727
Cucsa.066910 Cucumis sativus Cucsa.066910 I 0.727
Cla018417 Citrullus lanatus Cla018417 I 0.727
PGSC0003DMG400027190 Solanum tuberosum PGSC0003DMG400027190 I 0.726
29814.m000736 Ricinus communis 29814.m000736 I 0.726
Solyc05g052850.2 Solanum lycopersicum Solyc05g052850.2 I 0.726
PK16550.1 Cannabis sativa PK16550.1 I 0.725
mgf015566m Mimulus guttatus mgf015566m I 0.723
29801.m003096 Ricinus communis 29801.m003096 I 0.723
PK01153.1 Cannabis sativa PK01153.1 I 0.722
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I 0.721
GLYMA14G06870 Glycine max GLYMA14G06870 I 0.721
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I 0.720
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I 0.719
Pm021211 Prunus mume Pm021211 I 0.719
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I 0.718
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I 0.718
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I 0.718
PGSC0003DMG400020338 Solanum tuberosum PGSC0003DMG400020338 I 0.717
Solyc09g011780.2 Solanum lycopersicum Solyc09g011780.2 I 0.717
TCM_042629 Theobroma cacao TCM_042629 I 0.716
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I 0.716
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I 0.715
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I 0.715
Si032789m.g Setaria italica Si032789m.g I 0.715
Sb02g013010 Sorghum bicolor Sb02g013010 I 0.715
BGIOSGA030245 Oryza indica BGIOSGA030245 I 0.715
OS09G0106700 Oryza sativa OS09G0106700 I 0.715
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I 0.715
OBART09G00310 Oryza barthii OBART09G00310 I 0.715
OB09G10200 Oryza brachyantha OB09G10200 I 0.715
OPUNC12G06260 Oryza punctata OPUNC12G06260 I 0.715
OMERI08G05160 Oryza meridionalis OMERI08G05160 I 0.715
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I 0.715
ONIVA09G00250 Oryza nivara ONIVA09G00250 I 0.715
evm.TU.supercontig_19.155 Carica papaya evm.TU.supercontig_19.155 I 0.713
Lus10040940.g Linum usitatissimum Lus10040940.g I 0.712
Pm018951 Prunus mume Pm018951 I 0.712
gene20888-v1.0-hybrid Fragaria vesca gene20888-v1.0-hybrid I 0.712
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I 0.712
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I 0.711
GRMZM2G087955 Zea mays GRMZM2G087955 I 0.710
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I 0.709
cassava8939.m1 Manihot esculenta cassava8939.m1 I 0.709
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I 0.709
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I 0.706
Pm018862 Prunus mume Pm018862 I 0.706
TCM_021796 Theobroma cacao TCM_021796 I 0.706
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I 0.706
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I 0.706
Sb03g039950 Sorghum bicolor Sb03g039950 I 0.706
LPERR09G00910 Leersia perrieri LPERR09G00910 I 0.706
Pavir.J13677 Panicum virgatum Pavir.J13677 I 0.706
MLOC_64817 Hordeum vulgare MLOC_64817 I 0.706
Pavir.Ea03398 Panicum virgatum Pavir.Ea03398 I 0.706
GRMZM2G169316 Zea mays GRMZM2G169316 I 0.706
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I 0.705
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I 0.704
Aquca_007_00580 Aquilegia coerulea Aquca_007_00580 I 0.704
MDP0000319124 Malus domestica MDP0000319124 I 0.703
MDP0000203733 Malus domestica MDP0000203733 I 0.703
MDP0000284922 Malus domestica MDP0000284922 I 0.702
Lus10007503.g Linum usitatissimum Lus10007503.g I 0.701
Lus10028979.g Linum usitatissimum Lus10028979.g I 0.701
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I 0.700
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I 0.700
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I 0.700
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I 0.700
Lus10014103.g Linum usitatissimum Lus10014103.g I 0.699
GRMZM2G050550 Zea mays GRMZM2G050550 I 0.697
MTR_4g019370 Medicago truncatula MTR_4g019370 I 0.697
MDP0000187872 Malus domestica MDP0000187872 I 0.697
mgf025567m Mimulus guttatus mgf025567m I 0.697
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I 0.697
Gorai.010G016800 Gossypium raimondii Gorai.010G016800 I 0.696
cassava41257.m1 Manihot esculenta cassava41257.m1 I 0.696
MYB109 Arabidopsis lyrata fgenesh2_kg.5__1999__AT3G55730.1 I 0.693
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I 0.692
PK07741.1 Cannabis sativa PK07741.1 D 0.692
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I 0.691
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I 0.691
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I 0.691
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I 0.691
Si017917m.g Setaria italica Si017917m.g I 0.690
Sb04g005940 Sorghum bicolor Sb04g005940 I 0.690
LPERR02G05810 Leersia perrieri LPERR02G05810 I 0.690
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I 0.690
Pavir.J23512 Panicum virgatum Pavir.J23512 I 0.690
GRMZM2G145444 Zea mays GRMZM2G145444 I 0.690
MYB1 Arabidopsis thaliana AT3G09230 D 0.689
Cucsa.232630 Cucumis sativus Cucsa.232630 I 0.688
PK29071.1 Cannabis sativa PK29071.1 I 0.688
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I 0.688
PGSC0003DMG400007994 Solanum tuberosum PGSC0003DMG400007994 I 0.688
Cla022889 Citrullus lanatus Cla022889 I 0.688
Solyc04g079360.1 Solanum lycopersicum Solyc04g079360.1 I 0.688
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I 0.687
VIT_18s0001g11170 Vitis vinifera VIT_18s0001g11170 I 0.686
TCM_033907 Theobroma cacao TCM_033907 I 0.684
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I 0.683
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I 0.683
MTR_4g094982 Medicago truncatula MTR_4g094982 I 0.682
MDP0000807341 Malus domestica MDP0000807341 I 0.682
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I 0.681
TCM_042474 Theobroma cacao TCM_042474 I 0.680
mgf018580m Mimulus guttatus mgf018580m I 0.680
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I 0.680
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I 0.679
Si001686m.g Setaria italica Si001686m.g I 0.679
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I 0.678
GLYMA02G42030 Glycine max GLYMA02G42030 I 0.678
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I 0.678
chr2.LjT13M01.180.nd Lotus japonicus chr2.LjT13M01.180.nd I 0.677
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I 0.677
VIT_08s0007g01540 Vitis vinifera VIT_08s0007g01540 I 0.677
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I 0.677
PK12959.1 Cannabis sativa PK12959.1 I 0.677
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I 0.676
Pm002576 Prunus mume Pm002576 I 0.676
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I 0.676
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I 0.676
MTR_3g101290 Medicago truncatula MTR_3g101290 I 0.674
MTR_6g015455 Medicago truncatula MTR_6g015455 I 0.674
OPUNC02G05820 Oryza punctata OPUNC02G05820 I 0.673
MDP0000478512 Malus domestica MDP0000478512 I 0.673
MDP0000463846 Malus domestica MDP0000463846 I 0.673
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I 0.673
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I 0.673
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I 0.673
ONIVA02G08210 Oryza nivara ONIVA02G08210 I 0.673
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I 0.673
BRADI2G55040 Brachypodium distachyon BRADI2G55040 I 0.673
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I 0.673
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I 0.673
GLYMA01G26650 Glycine max GLYMA01G26650 I 0.673
MLOC_7426 Hordeum vulgare MLOC_7426 I 0.673
GLYMA03G15810 Glycine max GLYMA03G15810 I 0.673
OMERI02G07700 Oryza meridionalis OMERI02G07700 I 0.673
OS02G0187700 Oryza sativa OS02G0187700 D 0.673
Pm005332 Prunus mume Pm005332 I 0.673
Cla020946 Citrullus lanatus Cla020946 I 0.673
LPERR01G32110 Leersia perrieri LPERR01G32110 I 0.672
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I 0.672
OB01G46120 Oryza brachyantha OB01G46120 I 0.672
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I 0.671
Lus10010238.g Linum usitatissimum Lus10010238.g I 0.671
mgf006151m Mimulus guttatus mgf006151m I 0.671
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I 0.670
PK17282.1 Cannabis sativa PK17282.1 I 0.670
30170.m013698 Ricinus communis 30170.m013698 I 0.670
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I 0.670
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I 0.670
PGSC0003DMG400044858 Solanum tuberosum PGSC0003DMG400044858 N 0.670
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I 0.670
cassava47374.m1 Manihot esculenta cassava47374.m1 I 0.670
MDP0000275800 Malus domestica MDP0000275800 I 0.669
Cagra.2515s0014 Capsella grandiflora Cagra.2515s0014 I 0.667
Carubv10013882m.g Capsella rubella Carubv10013882m.g I 0.667
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I 0.666
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I 0.666
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I 0.666
Carubv10023414m.g Capsella rubella Carubv10023414m.g I 0.666
Bo3g062160 Brassica oleracea Bo3g062160 I 0.666
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I 0.666
Cla013306 Citrullus lanatus Cla013306 I 0.665
TRAES3BF039800050CFD_g Triticum aestivum TRAES3BF039800050CFD_g I 0.665
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I 0.665
MLOC_10322 Hordeum vulgare MLOC_10322 I 0.665
Cucsa.244650 Cucumis sativus Cucsa.244650 I 0.664
BRADI2G28910 Brachypodium distachyon BRADI2G28910 N 0.663
Carubv10017397m.g Capsella rubella Carubv10017397m.g I 0.663
Cagra.0003s0013 Capsella grandiflora Cagra.0003s0013 I 0.663
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I 0.663
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I 0.663
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I 0.662
Sb0088s002210 Sorghum bicolor Sb0088s002210 N 0.662
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I 0.662
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I 0.661
LPERR01G40230 Leersia perrieri LPERR01G40230 I 0.661