CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g082910
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_5g082910
T274883_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.692
0.731
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.689
0.731
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.673
0.688
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES99620
Myb
19
65
KGSWSKTEDETLVKLVKENGARNWSVISNEIPGRSGKSCRLRWCNQL
AES99620
Myb
71
116
HLPFTPAEDSIIIEAHAVHGNKWATISRLLPGRTDNAIKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
202 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.803
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.792
Ca_12468
Cicer arietinum
Ca_12468
I
0.790
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.784
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.778
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.778
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.765
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.759
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.755
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.755
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.754
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.751
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
0.750
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.743
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.743
MDP0000298689
Malus domestica
MDP0000298689
I
0.739
mgf020432m
Mimulus guttatus
mgf020432m
I
0.735
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.735
Cla004431
Citrullus lanatus
Cla004431
I
0.733
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.730
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.730
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.730
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.728
27798.m000612
Ricinus communis
27798.m000612
I
0.727
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.727
Cla018417
Citrullus lanatus
Cla018417
I
0.727
PGSC0003DMG400027190
Solanum tuberosum
PGSC0003DMG400027190
I
0.726
29814.m000736
Ricinus communis
29814.m000736
I
0.726
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.726
PK16550.1
Cannabis sativa
PK16550.1
I
0.725
mgf015566m
Mimulus guttatus
mgf015566m
I
0.723
29801.m003096
Ricinus communis
29801.m003096
I
0.723
PK01153.1
Cannabis sativa
PK01153.1
I
0.722
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.721
GLYMA14G06870
Glycine max
GLYMA14G06870
I
0.721
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.720
PRUPE_ppa023154mg
Prunus persica
PRUPE_ppa023154mg
I
0.719
Pm021211
Prunus mume
Pm021211
I
0.719
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.718
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.718
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.718
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.717
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.717
TCM_042629
Theobroma cacao
TCM_042629
I
0.716
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.716
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.715
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.715
Si032789m.g
Setaria italica
Si032789m.g
I
0.715
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.715
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.715
OS09G0106700
Oryza sativa
OS09G0106700
I
0.715
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.715
OBART09G00310
Oryza barthii
OBART09G00310
I
0.715
OB09G10200
Oryza brachyantha
OB09G10200
I
0.715
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.715
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.715
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.715
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.715
evm.TU.supercontig_19.155
Carica papaya
evm.TU.supercontig_19.155
I
0.713
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.712
Pm018951
Prunus mume
Pm018951
I
0.712
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.712
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.712
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.711
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.710
SELMODRAFT_77255
Selaginella moellendorffii
SELMODRAFT_77255
I
0.709
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.709
SELMODRAFT_113522
Selaginella moellendorffii
SELMODRAFT_113522
I
0.709
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.706
Pm018862
Prunus mume
Pm018862
I
0.706
TCM_021796
Theobroma cacao
TCM_021796
I
0.706
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.706
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.706
Sb03g039950
Sorghum bicolor
Sb03g039950
I
0.706
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.706
Pavir.J13677
Panicum virgatum
Pavir.J13677
I
0.706
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.706
Pavir.Ea03398
Panicum virgatum
Pavir.Ea03398
I
0.706
GRMZM2G169316
Zea mays
GRMZM2G169316
I
0.706
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.705
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.704
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.704
MDP0000319124
Malus domestica
MDP0000319124
I
0.703
MDP0000203733
Malus domestica
MDP0000203733
I
0.703
MDP0000284922
Malus domestica
MDP0000284922
I
0.702
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.701
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.701
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.700
GSMUA_Achr6G33470_001
Musa acuminata
GSMUA_Achr6G33470_001
I
0.700
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.700
GSMUA_Achr5G28780_001
Musa acuminata
GSMUA_Achr5G28780_001
I
0.700
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.699
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.697
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.697
MDP0000187872
Malus domestica
MDP0000187872
I
0.697
mgf025567m
Mimulus guttatus
mgf025567m
I
0.697
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.697
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.696
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.696
MYB109
Arabidopsis lyrata
fgenesh2_kg.5__1999__AT3G55730.1
I
0.693
GSMUA_Achr9G03720_001
Musa acuminata
GSMUA_Achr9G03720_001
I
0.692
PK07741.1
Cannabis sativa
PK07741.1
D
0.692
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.691
MYB25
Arabidopsis lyrata
Al_scaffold_0004_2572
I
0.691
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.691
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.691
Si017917m.g
Setaria italica
Si017917m.g
I
0.690
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.690
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.690
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.690
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.690
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.690
MYB1
Arabidopsis thaliana
AT3G09230
D
0.689
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.688
PK29071.1
Cannabis sativa
PK29071.1
I
0.688
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.688
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.688
Cla022889
Citrullus lanatus
Cla022889
I
0.688
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.688
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.687
VIT_18s0001g11170
Vitis vinifera
VIT_18s0001g11170
I
0.686
TCM_033907
Theobroma cacao
TCM_033907
I
0.684
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.683
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.683
MTR_4g094982
Medicago truncatula
MTR_4g094982
I
0.682
MDP0000807341
Malus domestica
MDP0000807341
I
0.682
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.681
TCM_042474
Theobroma cacao
TCM_042474
I
0.680
mgf018580m
Mimulus guttatus
mgf018580m
I
0.680
SapurV1A.0262s0270
Salix purpurea
SapurV1A.0262s0270
I
0.680
Eucgr.H02226
Eucalyptus grandis
Eucgr.H02226
I
0.679
Si001686m.g
Setaria italica
Si001686m.g
I
0.679
Eucgr.J00189
Eucalyptus grandis
Eucgr.J00189
I
0.678
GLYMA02G42030
Glycine max
GLYMA02G42030
I
0.678
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
0.678
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.677
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.677
VIT_08s0007g01540
Vitis vinifera
VIT_08s0007g01540
I
0.677
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.677
PK12959.1
Cannabis sativa
PK12959.1
I
0.677
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.676
Pm002576
Prunus mume
Pm002576
I
0.676
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.676
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.676
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.674
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.674
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.673
MDP0000478512
Malus domestica
MDP0000478512
I
0.673
MDP0000463846
Malus domestica
MDP0000463846
I
0.673
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
0.673
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.673
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.673
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.673
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.673
BRADI2G55040
Brachypodium distachyon
BRADI2G55040
I
0.673
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.673
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.673
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.673
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.673
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.673
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.673
OS02G0187700
Oryza sativa
OS02G0187700
D
0.673
Pm005332
Prunus mume
Pm005332
I
0.673
Cla020946
Citrullus lanatus
Cla020946
I
0.673
LPERR01G32110
Leersia perrieri
LPERR01G32110
I
0.672
Aquca_009_00809
Aquilegia coerulea
Aquca_009_00809
I
0.672
OB01G46120
Oryza brachyantha
OB01G46120
I
0.672
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.671
Lus10010238.g
Linum usitatissimum
Lus10010238.g
I
0.671
mgf006151m
Mimulus guttatus
mgf006151m
I
0.671
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
0.670
PK17282.1
Cannabis sativa
PK17282.1
I
0.670
30170.m013698
Ricinus communis
30170.m013698
I
0.670
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.670
Gorai.005G234900
Gossypium raimondii
Gorai.005G234900
I
0.670
PGSC0003DMG400044858
Solanum tuberosum
PGSC0003DMG400044858
N
0.670
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
0.670
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
0.670
MDP0000275800
Malus domestica
MDP0000275800
I
0.669
Cagra.2515s0014
Capsella grandiflora
Cagra.2515s0014
I
0.667
Carubv10013882m.g
Capsella rubella
Carubv10013882m.g
I
0.667
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
0.666
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.666
Bostr.23794s0078
Boechera stricta
Bostr.23794s0078
I
0.666
Carubv10023414m.g
Capsella rubella
Carubv10023414m.g
I
0.666
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.666
Cagra.10445s0001
Capsella grandiflora
Cagra.10445s0001
I
0.666
Cla013306
Citrullus lanatus
Cla013306
I
0.665
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.665
Gorai.009G215900
Gossypium raimondii
Gorai.009G215900
I
0.665
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.665
Cucsa.244650
Cucumis sativus
Cucsa.244650
I
0.664
BRADI2G28910
Brachypodium distachyon
BRADI2G28910
N
0.663
Carubv10017397m.g
Capsella rubella
Carubv10017397m.g
I
0.663
Cagra.0003s0013
Capsella grandiflora
Cagra.0003s0013
I
0.663
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.663
SapurV1A.0339s0020
Salix purpurea
SapurV1A.0339s0020
I
0.663
e_gw1.9.342.1
Physcomitrella patens
e_gw1.9.342.1
I
0.662
Sb0088s002210
Sorghum bicolor
Sb0088s002210
N
0.662
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.662
Gorai.009G276400
Gossypium raimondii
Gorai.009G276400
I
0.661
LPERR01G40230
Leersia perrieri
LPERR01G40230
I
0.661