MTR_5g088060 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_5g088060 T274885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.676 0.702
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.665 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET00075 Myb 271 318

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_5g488160 Medicago truncatula MTR_5g488160 I 0.909
MTR_5g088010 Medicago truncatula MTR_5g088010 N 0.758
MTR_5g027570 Medicago truncatula MTR_5g027570 N 0.729
Ca_17598 Cicer arietinum Ca_17598 I 0.697
evm.TU.supercontig_13.246 Carica papaya evm.TU.supercontig_13.246 I 0.687
evm.TU.supercontig_13.248 Carica papaya evm.TU.supercontig_13.248 I 0.687
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I 0.676
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I 0.676
Cucsa.098110 Cucumis sativus Cucsa.098110 I 0.676
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I 0.676
Pm024648 Prunus mume Pm024648 I 0.676
MLOC_20277 Hordeum vulgare MLOC_20277 I 0.676
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I 0.676
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I 0.676
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I 0.676
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I 0.676
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I 0.676
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I 0.676
PK17526.1 Cannabis sativa PK17526.1 D 0.676
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I 0.676
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I 0.676
MDP0000758053 Malus domestica MDP0000758053 I 0.676
Lus10004248.g Linum usitatissimum Lus10004248.g I 0.676
Lus10036652.g Linum usitatissimum Lus10036652.g I 0.676
MDP0000230601 Malus domestica MDP0000230601 I 0.676
Ca_17597 Cicer arietinum Ca_17597 I 0.676
30147.m014028 Ricinus communis 30147.m014028 I 0.676
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I 0.676
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I 0.676
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I 0.676
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I 0.676
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I 0.676
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I 0.676
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I 0.676
Sb03g006450 Sorghum bicolor Sb03g006450 I 0.676
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I 0.676
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I 0.676
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I 0.676
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I 0.676
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I 0.676
TCM_013524 Theobroma cacao TCM_013524 I 0.676
GLYMA05G01640 Glycine max GLYMA05G01640 I 0.675
GLYMA17G10250 Glycine max GLYMA17G10250 I 0.675
MTR_5g027550 Medicago truncatula MTR_5g027550 N 0.673
GLYMA06G19960 Glycine max GLYMA06G19960 I 0.667
MTR_4g107230 Medicago truncatula MTR_4g107230 I 0.667
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I 0.667
GLYMA04G34720 Glycine max GLYMA04G34720 I 0.667
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I 0.667
SELMODRAFT_84280 Selaginella moellendorffii SELMODRAFT_84280 I 0.667
mgf003276m Mimulus guttatus mgf003276m I 0.667
chr6.CM0114.280.nc Lotus japonicus chr6.CM0114.280.nc I 0.666
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I 0.666
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I 0.666
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I 0.666
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I 0.666
PK23829.1 Cannabis sativa PK23829.1 D 0.665