MTR_6g090405 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_6g090405 T274909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.697 0.739
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.697 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH27234 Myb 14 62
KEH27234 Myb 69 113

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

279 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10009336m.g Citrus clementina Ciclev10009336m.g I 0.794
orange1.1g037024m.g Citrus sinensis orange1.1g037024m.g I 0.794
GLYMA17G16980 Glycine max GLYMA17G16980 I 0.741
MTR_3g103570 Medicago truncatula MTR_3g103570 I 0.735
GLYMA05G23080 Glycine max GLYMA05G23080 I 0.725
GRMZM2G090837 Zea mays GRMZM2G090837 I 0.721
GLYMA01G00805 Glycine max GLYMA01G00805 I 0.719
GSMUA_Achr9G13610_001 Musa acuminata GSMUA_Achr9G13610_001 I 0.713
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I 0.707
Carubv10002949m.g Capsella rubella Carubv10002949m.g I 0.706
Bra020228 Brassica rapa Bra020228 I 0.706
Cagra.3954s0035 Capsella grandiflora Cagra.3954s0035 I 0.706
RAX1 Arabidopsis lyrata Al_scaffold_0006_2171 I 0.706
Bra002448 Brassica rapa Bra002448 I 0.706
Bo2g024590 Brassica oleracea Bo2g024590 I 0.706
RAX1 Arabidopsis thaliana AT5G23000 I 0.706
Bostr.10199s0146 Boechera stricta Bostr.10199s0146 I 0.706
Thhalv10014063m.g Eutrema salsugineum Thhalv10014063m.g I 0.706
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.705
Gorai.001G010000 Gossypium raimondii Gorai.001G010000 I 0.704
ONIVA01G33470 Oryza nivara ONIVA01G33470 N 0.700
TRAES3BF016200140CFD_g Triticum aestivum TRAES3BF016200140CFD_g N 0.699
F775_22853 Aegilops tauschii F775_22853 N 0.699
OB05G32650 Oryza brachyantha OB05G32650 I 0.699
GLYMA07G15250 Glycine max GLYMA07G15250 I 0.698
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.697
Solyc07g006750.2 Solanum lycopersicum Solyc07g006750.2 I 0.697
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.697
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I 0.697
PRUPE_ppa023431mg Prunus persica PRUPE_ppa023431mg I 0.697
MDP0000809452 Malus domestica MDP0000809452 I 0.697
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I 0.697
PGSC0003DMG400018750 Solanum tuberosum PGSC0003DMG400018750 I 0.697
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.697
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.697
Pm008668 Prunus mume Pm008668 I 0.697
Bo2g168190 Brassica oleracea Bo2g168190 I 0.697
RAX3 Arabidopsis thaliana AT3G49690 D 0.697
gene27379-v1.0-hybrid Fragaria vesca gene27379-v1.0-hybrid I 0.697
ATMYB68 Arabidopsis thaliana AT5G65790 I 0.697
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.697
Cla019089 Citrullus lanatus Cla019089 I 0.697
Bo3g097710 Brassica oleracea Bo3g097710 I 0.697
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I 0.697
Cucsa.092250 Cucumis sativus Cucsa.092250 I 0.697
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I 0.697
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.697
Bra031847 Brassica rapa Bra031847 I 0.697
Carubv10027655m.g Capsella rubella Carubv10027655m.g I 0.697
Bra024419 Brassica rapa Bra024419 I 0.697
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I 0.694
Bostr.6864s0273 Boechera stricta Bostr.6864s0273 I 0.692
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.692
TCM_037245 Theobroma cacao TCM_037245 I 0.692
GSMUA_Achr7G19530_001 Musa acuminata GSMUA_Achr7G19530_001 I 0.691
POPTR_0007s14630 Populus trichocarpa POPTR_0007s14630 I 0.691
Lus10016139.g Linum usitatissimum Lus10016139.g I 0.691
Lus10021428.g Linum usitatissimum Lus10021428.g I 0.691
Cla008857 Citrullus lanatus Cla008857 I 0.691
Si030544m.g Setaria italica Si030544m.g I 0.691
Pavir.Ba03178 Panicum virgatum Pavir.Ba03178 I 0.691
Sb02g012860 Sorghum bicolor Sb02g012860 I 0.691
Cla023198 Citrullus lanatus Cla023198 I 0.690
ORUFI01G32340 Oryza rufipogon ORUFI01G32340 N 0.689
OS01G0722300 Oryza sativa OS01G0722300 N 0.689
BGIOSGA004364 Oryza indica BGIOSGA004364 N 0.689
OBART01G29250 Oryza barthii OBART01G29250 N 0.689
OGLUM01G33320 Oryza glumaepatula OGLUM01G33320 N 0.689
Sb03g033160 Sorghum bicolor Sb03g033160 N 0.689
OB01G38240 Oryza brachyantha OB01G38240 N 0.689
GSMUA_Achr5G22760_001 Musa acuminata GSMUA_Achr5G22760_001 I 0.688
Bra017963 Brassica rapa Bra017963 I 0.688
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.688
Bo9g018910 Brassica oleracea Bo9g018910 I 0.688
Aquca_068_00041 Aquilegia coerulea Aquca_068_00041 I 0.688
Eucgr.C03699 Eucalyptus grandis Eucgr.C03699 I 0.687
ONIVA08G08510 Oryza nivara ONIVA08G08510 I 0.686
OGLUM08G08330 Oryza glumaepatula OGLUM08G08330 I 0.686
OBART08G07560 Oryza barthii OBART08G07560 I 0.686
ORGLA08G0066000 Oryza glaberrima ORGLA08G0066000 I 0.686
ORUFI08G08790 Oryza rufipogon ORUFI08G08790 I 0.686
OMERI10G01610 Oryza meridionalis OMERI10G01610 I 0.686
Sb07g008580 Sorghum bicolor Sb07g008580 I 0.686
Pavir.J37063 Panicum virgatum Pavir.J37063 I 0.686
Bo9g147050 Brassica oleracea Bo9g147050 I 0.686
BGIOSGA028296 Oryza indica BGIOSGA028296 I 0.686
OPUNC08G07200 Oryza punctata OPUNC08G07200 I 0.686
Si015585m.g Setaria italica Si015585m.g I 0.686
OS08G0248700 Oryza sativa OS08G0248700 I 0.686
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.685
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I 0.685
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.685
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.685
Bra011785 Brassica rapa Bra011785 I 0.684
mgf021409m Mimulus guttatus mgf021409m I 0.683
Gorai.010G079900 Gossypium raimondii Gorai.010G079900 I 0.683
mgf011646m Mimulus guttatus mgf011646m I 0.682
evm.TU.supercontig_65.37 Carica papaya evm.TU.supercontig_65.37 I 0.682
SapurV1A.0608s0210 Salix purpurea SapurV1A.0608s0210 I 0.682
Gorai.007G227500 Gossypium raimondii Gorai.007G227500 I 0.681
GSMUA_Achr4G25260_001 Musa acuminata GSMUA_Achr4G25260_001 I 0.681
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I 0.681
Pavir.Ea02676 Panicum virgatum Pavir.Ea02676 N 0.680
Cla018072 Citrullus lanatus Cla018072 I 0.680
Cucsa.306690 Cucumis sativus Cucsa.306690 I 0.680
Solyc12g008670.1 Solanum lycopersicum Solyc12g008670.1 I 0.680
Pavir.Eb02926 Panicum virgatum Pavir.Eb02926 N 0.680
Sb02g025350 Sorghum bicolor Sb02g025350 I 0.678
Pavir.Aa03183 Panicum virgatum Pavir.Aa03183 I 0.678
Pavir.Bb02272 Panicum virgatum Pavir.Bb02272 I 0.678
Si030282m.g Setaria italica Si030282m.g I 0.678
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I 0.677
MDP0000124992 Malus domestica MDP0000124992 I 0.677
Pavir.Fb01086 Panicum virgatum Pavir.Fb01086 I 0.677
TCM_000861 Theobroma cacao TCM_000861 I 0.677
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.677
MDP0000786507 Malus domestica MDP0000786507 I 0.677
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I 0.677
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I 0.677
MDP0000262514 Malus domestica MDP0000262514 I 0.677
Pavir.Ab03119 Panicum virgatum Pavir.Ab03119 I 0.676
Si017415m.g Setaria italica Si017415m.g I 0.676
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.676
Traes_6DL_29EF04226 Triticum aestivum Traes_6DL_29EF04226 I 0.676
TRIUR3_13802 Triticum urartu TRIUR3_13802 I 0.676
Traes_6BL_7755E4A8A Triticum aestivum Traes_6BL_7755E4A8A I 0.676
Traes_6AL_FF1508B19 Triticum aestivum Traes_6AL_FF1508B19 I 0.676
BGIOSGA009166 Oryza indica BGIOSGA009166 I 0.676
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.676
F775_22184 Aegilops tauschii F775_22184 I 0.676
GRMZM2G015021 Zea mays GRMZM2G015021 I 0.676
OS02G0786400 Oryza sativa OS02G0786400 I 0.676
LPERR02G28940 Leersia perrieri LPERR02G28940 I 0.676
OBART02G35180 Oryza barthii OBART02G35180 I 0.676
Pavir.Aa00264 Panicum virgatum Pavir.Aa00264 I 0.676
MLOC_58499 Hordeum vulgare MLOC_58499 I 0.676
ORUFI02G36680 Oryza rufipogon ORUFI02G36680 I 0.676
OB02G41990 Oryza brachyantha OB02G41990 I 0.676
OLONG_007639 Oryza longistaminata OLONG_007639 I 0.676
OGLUM02G36330 Oryza glumaepatula OGLUM02G36330 I 0.676
ORGLA02G0304700 Oryza glaberrima ORGLA02G0304700 I 0.676
ONIVA02G37300 Oryza nivara ONIVA02G37300 I 0.676
OPUNC02G32390 Oryza punctata OPUNC02G32390 I 0.676
GRMZM2G006352 Zea mays GRMZM2G006352 I 0.675
Carubv10006843m.g Capsella rubella Carubv10006843m.g I 0.675
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I 0.675
MYB87 Arabidopsis lyrata fgenesh2_kg.7__271__AT4G37780.1 I 0.675
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I 0.675
Cagra.4290s0002 Capsella grandiflora Cagra.4290s0002 I 0.675
Bostr.25542s0241 Boechera stricta Bostr.25542s0241 I 0.675
MYB87 Arabidopsis thaliana AT4G37780 I 0.675
Cucsa.288590 Cucumis sativus Cucsa.288590 I 0.674
GSMUA_Achr1G04910_001 Musa acuminata GSMUA_Achr1G04910_001 I 0.674
GSMUA_Achr4G01050_001 Musa acuminata GSMUA_Achr4G01050_001 I 0.674
GSMUA_Achr7G25060_001 Musa acuminata GSMUA_Achr7G25060_001 I 0.674
Lus10001394.g Linum usitatissimum Lus10001394.g I 0.672
Pm026353 Prunus mume Pm026353 I 0.672
Lus10023002.g Linum usitatissimum Lus10023002.g I 0.672
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.672
BRADI3G18977 Brachypodium distachyon BRADI3G18977 I 0.672
Traes_1BL_02507996C Triticum aestivum Traes_1BL_02507996C I 0.672
Bo8g078940 Brassica oleracea Bo8g078940 I 0.672
MLOC_56989 Hordeum vulgare MLOC_56989 I 0.672
GLYMA17G35020 Glycine max GLYMA17G35020 I 0.672
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.672
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.672
Traes_1AL_50CECDF43 Triticum aestivum Traes_1AL_50CECDF43 I 0.672
Traes_1DL_FCDEFA244 Triticum aestivum Traes_1DL_FCDEFA244 I 0.672
MDP0000836365 Malus domestica MDP0000836365 I 0.671
mgf020328m Mimulus guttatus mgf020328m I 0.671
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.671
MDP0000785820 Malus domestica MDP0000785820 I 0.671
Cucsa.385830 Cucumis sativus Cucsa.385830 I 0.670
TCM_038898 Theobroma cacao TCM_038898 I 0.670
GSMUA_Achr6G30830_001 Musa acuminata GSMUA_Achr6G30830_001 I 0.670
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.670
Cucsa.292610 Cucumis sativus Cucsa.292610 I 0.670
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.670
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.670
mgf002711m Mimulus guttatus mgf002711m I 0.669
GSMUA_Achr1G03140_001 Musa acuminata GSMUA_Achr1G03140_001 I 0.668
Bo1g003420 Brassica oleracea Bo1g003420 I 0.668
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.668
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.667
MDP0000322479 Malus domestica MDP0000322479 I 0.667
GLYMA17G07330 Glycine max GLYMA17G07330 I 0.667
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.667
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.667
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.667
GLYMA13G01200 Glycine max GLYMA13G01200 I 0.667
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I 0.667
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.667
Ca_03266 Cicer arietinum Ca_03266 I 0.667
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.667
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.667
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.667
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.667
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.667
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.667
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.667
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I 0.667
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.667
PK05741.1 Cannabis sativa PK05741.1 I 0.667
mgf021784m Mimulus guttatus mgf021784m I 0.667
mgf024894m Mimulus guttatus mgf024894m I 0.667
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.667
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.667
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.667
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.667
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.667
PK02305.1 Cannabis sativa PK02305.1 I 0.667
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I 0.667
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.667
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.667
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I 0.667
Ca_09203 Cicer arietinum Ca_09203 I 0.667
Cla014272 Citrullus lanatus Cla014272 I 0.667
PK26008.1 Cannabis sativa PK26008.1 I 0.667
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.667
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.667
Pm002200 Prunus mume Pm002200 I 0.667
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.666
BGIOSGA004221 Oryza indica BGIOSGA004221 I 0.666
Si002350m.g Setaria italica Si002350m.g I 0.666
ORUFI01G29860 Oryza rufipogon ORUFI01G29860 I 0.666
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.666
ORGLA01G0219900 Oryza glaberrima ORGLA01G0219900 I 0.666
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.666
OBART01G26850 Oryza barthii OBART01G26850 I 0.666
OGLUM01G30780 Oryza glumaepatula OGLUM01G30780 I 0.666
Pavir.J34453 Panicum virgatum Pavir.J34453 I 0.666
OS05G0553400 Oryza sativa OS05G0553400 I 0.666
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.666
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.665
Traes_3AL_7C031019E Triticum aestivum Traes_3AL_7C031019E N 0.665
evm.TU.supercontig_160.24 Carica papaya evm.TU.supercontig_160.24 I 0.665
Bra037828 Brassica rapa Bra037828 I 0.664
MDP0000851495 Malus domestica MDP0000851495 I 0.663
GSMUA_Achr6G01850_001 Musa acuminata GSMUA_Achr6G01850_001 I 0.663
OB01G36020 Oryza brachyantha OB01G36020 I 0.663
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.663
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.663
VIT_11s0016g02780 Vitis vinifera VIT_11s0016g02780 I 0.663
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I 0.663
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.663
LPERR01G22970 Leersia perrieri LPERR01G22970 I 0.663
Si022874m.g Setaria italica Si022874m.g I 0.663
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.662
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.662
Solyc02g091980.1 Solanum lycopersicum Solyc02g091980.1 I 0.662
PK16424.1 Cannabis sativa PK16424.1 I 0.662
PGSC0003DMG400021401 Solanum tuberosum PGSC0003DMG400021401 I 0.662
F775_02630 Aegilops tauschii F775_02630 I 0.662
TCM_042012 Theobroma cacao TCM_042012 I 0.661
Pm001105 Prunus mume Pm001105 I 0.661
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I 0.661
LjT05A08.60.nd Lotus japonicus LjT05A08.60.nd I 0.661
Ca_17470 Cicer arietinum Ca_17470 I 0.661
LjSGA_028088.1 Lotus japonicus LjSGA_028088.1 I 0.661
cassava27131.m1 Manihot esculenta cassava27131.m1 I 0.661
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I 0.661
cassava28503.m1 Manihot esculenta cassava28503.m1 I 0.661
GLYMA11G19980 Glycine max GLYMA11G19980 I 0.661
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I 0.661
MTR_4g057635 Medicago truncatula MTR_4g057635 I 0.661
gene28902-v1.0-hybrid Fragaria vesca gene28902-v1.0-hybrid I 0.661
Lus10013830.g Linum usitatissimum Lus10013830.g I 0.661
MDP0000245436 Malus domestica MDP0000245436 I 0.661
Lus10026543.g Linum usitatissimum Lus10026543.g I 0.661
MDP0000229498 Malus domestica MDP0000229498 I 0.661
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.661
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.661
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.661
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I 0.661
GLYMA12G08480 Glycine max GLYMA12G08480 I 0.661
GLYMA12G30140 Glycine max GLYMA12G30140 I 0.661
GRMZM2G011422 Zea mays GRMZM2G011422 I 0.661
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I 0.661
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I 0.661