MTR_8g018410 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_8g018410 T274964_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.704 0.766
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.704 0.766
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.671 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET01646 Myb 5 57

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G00930 Glycine max GLYMA07G00930 I 0.758
GLYMA08G20270 Glycine max GLYMA08G20270 I 0.758
Carubv10009890m.g Capsella rubella Carubv10009890m.g I 0.722
Ciclev10026245m.g Citrus clementina Ciclev10026245m.g I 0.722
orange1.1g023740m.g Citrus sinensis orange1.1g023740m.g I 0.722
Gorai.009G143000 Gossypium raimondii Gorai.009G143000 I 0.704
Bostr.10273s0077 Boechera stricta Bostr.10273s0077 I 0.704
fgenesh2_kg.2__1540__AT1G72740.1 Arabidopsis lyrata fgenesh2_kg.2__1540__AT1G72740.1 I 0.704
Cagra.1013s0027 Capsella grandiflora Cagra.1013s0027 I 0.704
Bra016037 Brassica rapa Bra016037 I 0.704
Bo6g116150 Brassica oleracea Bo6g116150 I 0.704
Carubv10020636m.g Capsella rubella Carubv10020636m.g I 0.704
AT1G72740 Arabidopsis thaliana AT1G72740 D 0.704
Cucsa.341020 Cucumis sativus Cucsa.341020 I 0.701
Bra025967 Brassica rapa Bra025967 I 0.701
Bo5g023860 Brassica oleracea Bo5g023860 I 0.701
Cla012798 Citrullus lanatus Cla012798 I 0.701
Ca_10058 Cicer arietinum Ca_10058 I 0.699
scaffold_101953.1 Arabidopsis lyrata scaffold_101953.1 I 0.694
AT1G17520 Arabidopsis thaliana AT1G17520 I 0.694
Bra030992 Brassica rapa Bra030992 I 0.693
29706.m001328 Ricinus communis 29706.m001328 I 0.683
TCM_029078 Theobroma cacao TCM_029078 I 0.683
evm.TU.supercontig_106.31 Carica papaya evm.TU.supercontig_106.31 I 0.683
Bra016598 Brassica rapa Bra016598 I 0.683
Bo8g067280 Brassica oleracea Bo8g067280 I 0.683
cassava34930.m1 Manihot esculenta cassava34930.m1 I 0.683
Thhalv10008387m.g Eutrema salsugineum Thhalv10008387m.g I 0.683
Cagra.0824s0121 Capsella grandiflora Cagra.0824s0121 I 0.683
mgf009594m Mimulus guttatus mgf009594m I 0.675
Bo8g104830 Brassica oleracea Bo8g104830 I 0.673
Bostr.7128s0363 Boechera stricta Bostr.7128s0363 I 0.673
ONIVA01G32190 Oryza nivara ONIVA01G32190 I 0.671
OS01G0708000 Oryza sativa OS01G0708000 D 0.671
OBART01G28260 Oryza barthii OBART01G28260 I 0.671
OB01G37330 Oryza brachyantha OB01G37330 I 0.671
BGIOSGA004300 Oryza indica BGIOSGA004300 I 0.671
OLONG_008666 Oryza longistaminata OLONG_008666 I 0.671
OGLUM01G32190 Oryza glumaepatula OGLUM01G32190 I 0.671
OMERI05G07460 Oryza meridionalis OMERI05G07460 I 0.671
ORGLA01G0233700 Oryza glaberrima ORGLA01G0233700 I 0.671
OPUNC01G28080 Oryza punctata OPUNC01G28080 I 0.671
ORUFI01G31370 Oryza rufipogon ORUFI01G31370 I 0.671
MTR_2g099610 Medicago truncatula MTR_2g099610 I 0.665
Bra030894 Brassica rapa Bra030894 I 0.664
Bo3g184590 Brassica oleracea Bo3g184590 I 0.664