MTR_8g031360 (Medicago truncatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 MTR_8g031360 T274970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.797 0.892
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.671 0.720
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.671 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH18894 Myb 15 63
KEH18894 Myb 69 114

Links

Other Myb/SANT family TFs
Other Medicago truncatula TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_13779 Cicer arietinum Ca_13779 I 0.909
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.830
Cla021563 Citrullus lanatus Cla021563 I 0.830
MTR_7g076740 Medicago truncatula MTR_7g076740 I 0.827
Ca_06226 Cicer arietinum Ca_06226 I 0.821
GLYMA18G46480 Glycine max GLYMA18G46480 I 0.813
GLYMA09G39721 Glycine max GLYMA09G39721 I 0.813
Pm018056 Prunus mume Pm018056 I 0.808
PRUPE_ppa007268mg Prunus persica PRUPE_ppa007268mg I 0.808
Solyc01g094360.2 Solanum lycopersicum Solyc01g094360.2 I 0.804
GLYMA03G01540 Glycine max GLYMA03G01540 I 0.803
PGSC0003DMG400000027 Solanum tuberosum PGSC0003DMG400000027 I 0.801
30174.m009001 Ricinus communis 30174.m009001 I 0.801
AtMYB17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002102 I 0.797
AtMYB17 Arabidopsis thaliana AT3G61250 D 0.797
PK05754.1 Cannabis sativa PK05754.1 I 0.795
GLYMA07G07960 Glycine max GLYMA07G07960 I 0.794
Carubv10018382m.g Capsella rubella Carubv10018382m.g I 0.785
Cagra.3373s0030 Capsella grandiflora Cagra.3373s0030 I 0.785
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.778
Bo8g095790 Brassica oleracea Bo8g095790 I 0.778
Bra007588 Brassica rapa Bra007588 I 0.778
cassava25066.valid.m1 Manihot esculenta cassava25066.valid.m1 I 0.777
SapurV1A.0024s0060 Salix purpurea SapurV1A.0024s0060 I 0.777
Lus10030378.g Linum usitatissimum Lus10030378.g I 0.777
TCM_005371 Theobroma cacao TCM_005371 I 0.777
gene19065-v1.0-hybrid Fragaria vesca gene19065-v1.0-hybrid I 0.771
Lus10014784.g Linum usitatissimum Lus10014784.g I 0.768
Gorai.004G157600 Gossypium raimondii Gorai.004G157600 I 0.764
Gorai.001G169700 Gossypium raimondii Gorai.001G169700 I 0.763
Bostr.13158s0117 Boechera stricta Bostr.13158s0117 I 0.761
AtMYB17 Populus trichocarpa POPTR_0014s07700 I 0.761
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.760
AtMYB17 Vitis vinifera VIT_15s0046g03190 I 0.759
SapurV1A.0533s0230 Salix purpurea SapurV1A.0533s0230 I 0.757
Bra003443 Brassica rapa Bra003443 I 0.748
orange1.1g021486m.g Citrus sinensis orange1.1g021486m.g I 0.747
Ciclev10021268m.g Citrus clementina Ciclev10021268m.g I 0.747
Eucgr.E00175 Eucalyptus grandis Eucgr.E00175 I 0.745
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.743
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.743
Solyc05g048830.2 Solanum lycopersicum Solyc05g048830.2 I 0.737
PGSC0003DMG400021654 Solanum tuberosum PGSC0003DMG400021654 I 0.737
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.736
Bra014446 Brassica rapa Bra014446 I 0.732
mgf012840m Mimulus guttatus mgf012840m I 0.730
Bo6g077600 Brassica oleracea Bo6g077600 I 0.730
cassava40203.m1 Manihot esculenta cassava40203.m1 I 0.726
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.717
BRADI3G49987 Brachypodium distachyon BRADI3G49987 I 0.711
chr1.CM0591.530.nd Lotus japonicus chr1.CM0591.530.nd I 0.707
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.706
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.705
GLYMA01G44370 Glycine max GLYMA01G44370 I 0.704
GLYMA11G01150 Glycine max GLYMA11G01150 I 0.704
Traes_2AL_5EE86C5BC Triticum aestivum Traes_2AL_5EE86C5BC I 0.702
Ciclev10003958m.g Citrus clementina Ciclev10003958m.g I 0.698
Pavir.Ab02419 Panicum virgatum Pavir.Ab02419 I 0.698
Si017934m.g Setaria italica Si017934m.g I 0.698
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.698
orange1.1g037998m.g Citrus sinensis orange1.1g037998m.g I 0.698
LPERR04G19330 Leersia perrieri LPERR04G19330 I 0.697
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.696
POPTR_0015s13180 Populus trichocarpa POPTR_0015s13180 I 0.696
orange1.1g045434m.g Citrus sinensis orange1.1g045434m.g I 0.694
Ciclev10026023m.g Citrus clementina Ciclev10026023m.g I 0.694
Pavir.Aa01232 Panicum virgatum Pavir.Aa01232 I 0.694
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.691
Eucgr.I00442 Eucalyptus grandis Eucgr.I00442 I 0.691
GSMUA_Achr6G04130_001 Musa acuminata GSMUA_Achr6G04130_001 I 0.690
Traes_2AL_B01AE830F Triticum aestivum Traes_2AL_B01AE830F I 0.687
F775_02773 Aegilops tauschii F775_02773 I 0.687
POPTR_0002s09720 Populus trichocarpa POPTR_0002s09720 I 0.686
BGIOSGA014443 Oryza indica BGIOSGA014443 I 0.684
ONIVA04G19830 Oryza nivara ONIVA04G19830 I 0.684
OGLUM04G23540 Oryza glumaepatula OGLUM04G23540 I 0.684
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.684
OBART04G23600 Oryza barthii OBART04G23600 I 0.684
ORGLA04G0201500 Oryza glaberrima ORGLA04G0201500 I 0.684
OPUNC04G21140 Oryza punctata OPUNC04G21140 I 0.684
ORUFI04G25320 Oryza rufipogon ORUFI04G25320 I 0.684
OS04G0593200 Oryza sativa OS04G0593200 I 0.684
evm.TU.supercontig_90.68 Carica papaya evm.TU.supercontig_90.68 I 0.683
OB06G17320 Oryza brachyantha OB06G17320 I 0.683
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.683
Si006790m.g Setaria italica Si006790m.g I 0.683
cassava26282.m1 Manihot esculenta cassava26282.m1 I 0.683
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.683
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.683
Traes_6DL_41CBE9959 Triticum aestivum Traes_6DL_41CBE9959 I 0.682
F775_27854 Aegilops tauschii F775_27854 I 0.682
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.681
GSMUA_Achr9G14850_001 Musa acuminata GSMUA_Achr9G14850_001 I 0.681
chr2.CM0124.80.nc Lotus japonicus chr2.CM0124.80.nc I 0.681
OB04G30520 Oryza brachyantha OB04G30520 I 0.681
ORUFI02G27000 Oryza rufipogon ORUFI02G27000 I 0.680
BGIOSGA008700 Oryza indica BGIOSGA008700 I 0.680
OB02G32960 Oryza brachyantha OB02G32960 I 0.680
Traes_2AL_E5B3B79F7 Triticum aestivum Traes_2AL_E5B3B79F7 I 0.680
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.680
OS02G0641900 Oryza sativa OS02G0641900 I 0.680
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.680
Traes_2BL_560CCE975 Triticum aestivum Traes_2BL_560CCE975 I 0.680
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.679
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.679
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I 0.679
OS06G0221000 Oryza sativa OS06G0221000 I 0.679
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.679
ONIVA06G08940 Oryza nivara ONIVA06G08940 I 0.679
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.679
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I 0.679
OBART06G07710 Oryza barthii OBART06G07710 I 0.679
OB08G25790 Oryza brachyantha OB08G25790 I 0.679
Traes_7DS_469ED3135 Triticum aestivum Traes_7DS_469ED3135 I 0.679
F775_06136 Aegilops tauschii F775_06136 I 0.679
Traes_7BS_7E91DE546 Triticum aestivum Traes_7BS_7E91DE546 I 0.679
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.679
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.679
OMERI06G09300 Oryza meridionalis OMERI06G09300 I 0.679
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.678
Cucsa.312940 Cucumis sativus Cucsa.312940 I 0.678
MDP0000320772 Malus domestica MDP0000320772 I 0.678
Pm002011 Prunus mume Pm002011 I 0.678
F775_26732 Aegilops tauschii F775_26732 I 0.678
Traes_6DL_499F64524 Triticum aestivum Traes_6DL_499F64524 I 0.678
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.678
Cla016484 Citrullus lanatus Cla016484 I 0.678
GLYMA02G13770 Glycine max GLYMA02G13770 I 0.678
Traes_6BL_5A2DB8F78 Triticum aestivum Traes_6BL_5A2DB8F78 I 0.678
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.677
GLYMA06G10840 Glycine max GLYMA06G10840 I 0.677
evm.TU.supercontig_36.134 Carica papaya evm.TU.supercontig_36.134 I 0.677
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.677
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.677
Ca_11832 Cicer arietinum Ca_11832 I 0.677
TRIUR3_26633 Triticum urartu TRIUR3_26633 I 0.677
Traes_2DL_6BD0572DF Triticum aestivum Traes_2DL_6BD0572DF I 0.675
Traes_2DL_25FD0FFB4 Triticum aestivum Traes_2DL_25FD0FFB4 I 0.675
Lus10036472.g Linum usitatissimum Lus10036472.g I 0.674
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.674
Lus10041142.g Linum usitatissimum Lus10041142.g I 0.674
MDP0000302984 Malus domestica MDP0000302984 I 0.674
MDP0000228252 Malus domestica MDP0000228252 I 0.674
Solyc04g056310.2 Solanum lycopersicum Solyc04g056310.2 I 0.674
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.672
Traes_2AL_FBC0ED0EE Triticum aestivum Traes_2AL_FBC0ED0EE N 0.671
MYB92 Arabidopsis lyrata fgenesh2_kg.6__990__AT5G10280.1 I 0.671
MYB92 Arabidopsis thaliana AT5G10280 D 0.671
Bostr.13175s0070 Boechera stricta Bostr.13175s0070 I 0.671
PK13689.1 Cannabis sativa PK13689.1 I 0.670
Pavir.Db01850 Panicum virgatum Pavir.Db01850 I 0.670
Pavir.Da01312 Panicum virgatum Pavir.Da01312 I 0.670
LjT20L14.140.nd Lotus japonicus LjT20L14.140.nd I 0.670
OPUNC03G18740 Oryza punctata OPUNC03G18740 I 0.670
e_gw1.45.189.1 Physcomitrella patens e_gw1.45.189.1 I 0.670
AtMYB93 Vitis vinifera VIT_18s0001g05670 I 0.670
MTR_5g007370 Medicago truncatula MTR_5g007370 I 0.670
Si008086m.g Setaria italica Si008086m.g I 0.670
ORUFI06G07920 Oryza rufipogon ORUFI06G07920 I 0.669
Traes_2DL_54D11D5E7 Triticum aestivum Traes_2DL_54D11D5E7 I 0.669
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.668
GLYMA04G11040 Glycine max GLYMA04G11040 I 0.668
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.668
AMTR_s00038p00183620 Amborella trichopoda AMTR_s00038p00183620 I 0.668
cassava4659.m1 Manihot esculenta cassava4659.m1 I 0.668
MLOC_51960 Hordeum vulgare MLOC_51960 I 0.666
MDP0000127521 Malus domestica MDP0000127521 I 0.666
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.666
GLYMA12G01960 Glycine max GLYMA12G01960 I 0.665
GRMZM2G081557 Zea mays GRMZM2G081557 N 0.665
VIT_11s0078g00480 Vitis vinifera VIT_11s0078g00480 I 0.664
GLYMA11G11570 Glycine max GLYMA11G11570 I 0.663
POPTR_0007s05360 Populus trichocarpa POPTR_0007s05360 I 0.663
Bra028593 Brassica rapa Bra028593 I 0.662
Bo2g009800 Brassica oleracea Bo2g009800 I 0.662
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.661
MLOC_52134 Hordeum vulgare MLOC_52134 I 0.661
Traes_6AL_2BA02CAA9 Triticum aestivum Traes_6AL_2BA02CAA9 I 0.661
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.661
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.661
TRIUR3_03772 Triticum urartu TRIUR3_03772 I 0.661
Traes_6DL_8BF29D46C Triticum aestivum Traes_6DL_8BF29D46C I 0.661
Traes_6BL_0D6CD031E Triticum aestivum Traes_6BL_0D6CD031E I 0.661
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.661