OB07G28650 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB07G28650 T275353_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB96
M07153_2.00
Arabidopsis thaliana
HHHHHYHHCCAACYAHYWNHN

NDNWRDTRGTTGGDDRDDDDD
Dap-seq
OMalley et al.(2016)
MYB96_colamp_a
0.819 0.914
MYB96
M07154_2.00
Arabidopsis thaliana
YAMCHNCCAMCHAHHHHH

DDDDDTDGKTGGNDGKTR
Dap-seq
OMalley et al.(2016)
MYB96_col_b
0.819 0.914
MYB94
M02298_2.00
Arabidopsis thaliana
DACCGGTH

DACCGGTH
PBM
Weirauch et al.(2014)
pTH7085
0.816 0.903
MYB94
M07094_2.00
Arabidopsis thaliana
HHNYHYCAACYACYWHHNN

NNDDWRGTRGTTGRDRNDD
Dap-seq
OMalley et al.(2016)
MYB94_col_b
0.816 0.903
MYB30
M07089_2.00
Arabidopsis thaliana
NHHHCAACYACYWHH

DDWRGTRGTTGDDDN
Dap-seq
OMalley et al.(2016)
MYB30_col_a
0.814 0.903
MYB30
M07090_2.00
Arabidopsis thaliana
HHHYYHCCAACYAMY

RKTRGTTGGDRRDDD
Dap-seq
OMalley et al.(2016)
MYB30_colamp_a
0.814 0.903
MYB60
M07001_2.00
Arabidopsis thaliana
HNNHYYCAACYACYWHHNN

NNDDWRGTRGTTGRRDNND
Dap-seq
OMalley et al.(2016)
MYB60_col
0.794 0.860
ATY13
M07035_2.00
Arabidopsis thaliana
HAMCHMCCAMCHAHH

DDTDGKTGGKDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_col_a
0.776 0.871
ATY13
M07036_2.00
Arabidopsis thaliana
HAMCHHCCAACHAHH

DDTDGTTGGDDGKTD
Dap-seq
OMalley et al.(2016)
ATY13_colamp_a
0.776 0.871
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB07G28650.1 Myb 14 61
OB07G28650.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

311 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA004375 Oryza indica BGIOSGA004375 N 0.000
ORUFI01G32450 Oryza rufipogon ORUFI01G32450 N 0.000
ORGLA01G0241600 Oryza glaberrima ORGLA01G0241600 N 0.000
OPUNC01G29200 Oryza punctata OPUNC01G29200 N 0.000
ONIVA01G33600 Oryza nivara ONIVA01G33600 N 0.000
OMERI01G27190 Oryza meridionalis OMERI01G27190 N 0.000
OLONG_011604 Oryza longistaminata OLONG_011604 N 0.000
OGLUM01G33420 Oryza glumaepatula OGLUM01G33420 N 0.000
OBART01G29370 Oryza barthii OBART01G29370 N 0.000
OB01G38320 Oryza brachyantha OB01G38320 N 0.000
LPERR01G25240 Leersia perrieri LPERR01G25240 N 0.000
OS01G0723700 Oryza sativa OS01G0723700 N 0.000