OB09G24400 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB09G24400 T275383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.897 0.978
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.897 0.978
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.821 0.903
MYB51
M07010_2.00
Arabidopsis thaliana
NHNHHNHNNNYYYACCWACYW

WRGTWGGTRRRNNNDNDDNDN
Dap-seq
OMalley et al.(2016)
MYB51_col_a
0.674 0.731
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.664 0.710
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB09G24400.1 Myb 14 61
OB09G24400.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

616 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VRN1 Arabidopsis lyrata fgenesh2_kg.3__2116__AT3G18990.1 I 0.000
VRN1 Arabidopsis thaliana AT3G18990 D 0.000
Bostr.19424s0762 Boechera stricta Bostr.19424s0762 I 0.000
Bo5g116790 Brassica oleracea Bo5g116790 I 0.000
Bo3g071890 Brassica oleracea Bo3g071890 I 0.000
Bo1g115980 Brassica oleracea Bo1g115980 I 0.000
Bra001729 Brassica rapa Bra001729 I 0.000
Bra022376 Brassica rapa Bra022376 I 0.000
Bra037544 Brassica rapa Bra037544 I 0.000
PK10791.1 Cannabis sativa PK10791.1 I 0.000
Cagra.5105s0003 Capsella grandiflora Cagra.5105s0003 I 0.000
Carubv10015637m.g Capsella rubella Carubv10015637m.g I 0.000
evm.TU.supercontig_62.76 Carica papaya evm.TU.supercontig_62.76 I 0.000
Cla010445 Citrullus lanatus Cla010445 I 0.000
Ciclev10028642m.g Citrus clementina Ciclev10028642m.g I 0.000
orange1.1g016655m.g Citrus sinensis orange1.1g016655m.g I 0.000
Thhalv10021075m.g Eutrema salsugineum Thhalv10021075m.g I 0.000
gene31955-v1.0-hybrid Fragaria vesca gene31955-v1.0-hybrid I 0.000
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.000
GLYMA20G01130 Glycine max GLYMA20G01130 N 0.000
Gorai.012G150900 Gossypium raimondii Gorai.012G150900 I 0.000
Gorai.002G006500 Gossypium raimondii Gorai.002G006500 I 0.000
Gorai.013G040000 Gossypium raimondii Gorai.013G040000 I 0.000
Gorai.005G240900 Gossypium raimondii Gorai.005G240900 I 0.000
Lus10012041.g Linum usitatissimum Lus10012041.g N 0.000
chr2.CM0262.200.nc Lotus japonicus chr2.CM0262.200.nc I 0.000
chr2.CM0308.470.nd Lotus japonicus chr2.CM0308.470.nd I 0.000
MDP0000555456 Malus domestica MDP0000555456 N 0.000
MDP0000238744 Malus domestica MDP0000238744 N 0.000
cassava29880.valid.m1 Manihot esculenta cassava29880.valid.m1 I 0.000
POPTR_0009s11170 Populus trichocarpa POPTR_0009s11170 I 0.000
POPTR_0004s15400 Populus trichocarpa POPTR_0004s15400 I 0.000
Pm021537 Prunus mume Pm021537 N 0.000
PRUPE_ppa006275mg Prunus persica PRUPE_ppa006275mg I 0.000
29851.m002498 Ricinus communis 29851.m002498 I 0.000
SapurV1A.0090s0340 Salix purpurea SapurV1A.0090s0340 I 0.000
TCM_006971 Theobroma cacao TCM_006971 I 0.000