OB12G21380 (Oryza brachyantha)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OB12G21380 T275409_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.684 0.896
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.684 0.896
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.674 0.857
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.674 0.857
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.674 0.857
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB12G21380.1 Myb 2 33
OB12G21380.1 Myb 39 84

Links

Other Myb/SANT family TFs
Other Oryza brachyantha TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB83 Vitis vinifera VIT_13s0064g00960 I 0.817
OMERI12G09660 Oryza meridionalis OMERI12G09660 I 0.791
ONIVA05G29400 Oryza nivara ONIVA05G29400 I 0.791
OGLUM12G15400 Oryza glumaepatula OGLUM12G15400 I 0.791
OBART12G13720 Oryza barthii OBART12G13720 I 0.791
MLOC_66577 Hordeum vulgare MLOC_66577 I 0.791
OPUNC12G12380 Oryza punctata OPUNC12G12380 I 0.791
ORGLA12G0120900 Oryza glaberrima ORGLA12G0120900 I 0.791
TRIUR3_33254 Triticum urartu TRIUR3_33254 I 0.791
Traes_5DS_AACA2EBA3 Triticum aestivum Traes_5DS_AACA2EBA3 I 0.791
Si024786m.g Setaria italica Si024786m.g I 0.791
ORUFI12G15040 Oryza rufipogon ORUFI12G15040 I 0.791
F775_06561 Aegilops tauschii F775_06561 I 0.791
Traes_5BS_2CB91C54A Triticum aestivum Traes_5BS_2CB91C54A I 0.791
BGIOSGA036092 Oryza indica BGIOSGA036092 I 0.791
BRADI4G06317 Brachypodium distachyon BRADI4G06317 I 0.785
Sb08g016620 Sorghum bicolor Sb08g016620 I 0.782
Pavir.Ca02370 Panicum virgatum Pavir.Ca02370 I 0.782
GRMZM2G052606 Zea mays GRMZM2G052606 I 0.782
LjSGA_026563.1 Lotus japonicus LjSGA_026563.1 I 0.763
Pm012272 Prunus mume Pm012272 I 0.757
GSMUA_AchrUn_randomG21080_001 Musa acuminata GSMUA_AchrUn_randomG21080_001 I 0.727
Solyc01g087130.2 Solanum lycopersicum Solyc01g087130.2 I 0.717
Traes_3DL_46F83C41D Triticum aestivum Traes_3DL_46F83C41D N 0.712
PK14287.1 Cannabis sativa PK14287.1 I 0.712
Gorai.001G138800 Gossypium raimondii Gorai.001G138800 I 0.704
Gorai.013G251100 Gossypium raimondii Gorai.013G251100 I 0.704
GLYMA12G36630 Glycine max GLYMA12G36630 I 0.703
Eucgr.B03684 Eucalyptus grandis Eucgr.B03684 I 0.701
TCM_005885 Theobroma cacao TCM_005885 I 0.701
evm.TU.supercontig_84.59 Carica papaya evm.TU.supercontig_84.59 I 0.701
Gorai.004G037300 Gossypium raimondii Gorai.004G037300 I 0.700
AMTR_s00022p00252530 Amborella trichopoda AMTR_s00022p00252530 I 0.700
GSMUA_Achr8G31350_001 Musa acuminata GSMUA_Achr8G31350_001 I 0.697
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.696
GLYMA13G27310 Glycine max GLYMA13G27310 I 0.694
Eucgr.G03385 Eucalyptus grandis Eucgr.G03385 I 0.694
Ciclev10033941m.g Citrus clementina Ciclev10033941m.g I 0.691
SapurV1A.0027s0350 Salix purpurea SapurV1A.0027s0350 I 0.691
orange1.1g019619m.g Citrus sinensis orange1.1g019619m.g I 0.691
GLYMA13G07020 Glycine max GLYMA13G07020 I 0.691
mgf024753m Mimulus guttatus mgf024753m I 0.691
POPTR_0001s27430 Populus trichocarpa POPTR_0001s27430 I 0.691
POPTR_0009s06630 Populus trichocarpa POPTR_0009s06630 I 0.691
PDK_20s1308492g002 Phoenix dactylifera PDK_20s1308492g002 N 0.690
cassava32908.m1 Manihot esculenta cassava32908.m1 I 0.687
PGSC0003DMG400006868 Solanum tuberosum PGSC0003DMG400006868 I 0.687
Cagra.1535s0018 Capsella grandiflora Cagra.1535s0018 I 0.684
Bostr.2902s0023 Boechera stricta Bostr.2902s0023 I 0.684
Carubv10001573m.g Capsella rubella Carubv10001573m.g I 0.684
ATMYB46 Arabidopsis lyrata scaffold_601291.1 I 0.684
Bra008875 Brassica rapa Bra008875 I 0.684
MYB46 Arabidopsis thaliana AT5G12870 D 0.684
Bo9g169270 Brassica oleracea Bo9g169270 I 0.684
Aquca_002_00671 Aquilegia coerulea Aquca_002_00671 I 0.682
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.679
Lus10037625.g Linum usitatissimum Lus10037625.g N 0.679
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.677
PDK_20s1844641g001 Phoenix dactylifera PDK_20s1844641g001 I 0.676
Thhalv10015560m.g Eutrema salsugineum Thhalv10015560m.g I 0.675
Bra006166 Brassica rapa Bra006166 I 0.675
Bo2g010970 Brassica oleracea Bo2g010970 I 0.675
Bo3g008870 Brassica oleracea Bo3g008870 I 0.675
Carubv10014093m.g Capsella rubella Carubv10014093m.g I 0.674
MYB83 Arabidopsis lyrata fgenesh2_kg.3__848__AT3G08500.1 I 0.674
Bra029696 Brassica rapa Bra029696 I 0.674
Thhalv10021052m.g Eutrema salsugineum Thhalv10021052m.g I 0.674
Cagra.2991s0041 Capsella grandiflora Cagra.2991s0041 I 0.674
MYB83 Arabidopsis thaliana AT3G08500 D 0.674
Bo5g139830 Brassica oleracea Bo5g139830 I 0.674
evm.TU.supercontig_640.1 Carica papaya evm.TU.supercontig_640.1 I 0.673
cassava39861.m1 Manihot esculenta cassava39861.m1 I 0.673
MYB86 Arabidopsis thaliana AT5G26660 I 0.672
PRUPE_ppa009566mg Prunus persica PRUPE_ppa009566mg I 0.671
orange1.1g021164m.g Citrus sinensis orange1.1g021164m.g I 0.671
MDP0000204495 Malus domestica MDP0000204495 I 0.671
MDP0000722954 Malus domestica MDP0000722954 I 0.671
VIT_06s0004g02110 Vitis vinifera VIT_06s0004g02110 I 0.671
Cla008683 Citrullus lanatus Cla008683 I 0.671
Aquca_014_00829 Aquilegia coerulea Aquca_014_00829 I 0.671
Ciclev10017658m.g Citrus clementina Ciclev10017658m.g I 0.671
Cucsa.065530 Cucumis sativus Cucsa.065530 I 0.671
cassava30676.valid.m1 Manihot esculenta cassava30676.valid.m1 I 0.671
Bostr.22252s0219 Boechera stricta Bostr.22252s0219 I 0.670
GSMUA_Achr2G07780_001 Musa acuminata GSMUA_Achr2G07780_001 I 0.670
Pm016295 Prunus mume Pm016295 I 0.669
PRUPE_ppa016923mg Prunus persica PRUPE_ppa016923mg I 0.669
Bo3g061630 Brassica oleracea Bo3g061630 I 0.669
MTR_3g028740 Medicago truncatula MTR_3g028740 I 0.669
Gorai.004G172700 Gossypium raimondii Gorai.004G172700 I 0.669
PGSC0003DMG400007360 Solanum tuberosum PGSC0003DMG400007360 I 0.666
GLYMA19G05080 Glycine max GLYMA19G05080 I 0.666
Solyc11g065840.1 Solanum lycopersicum Solyc11g065840.1 I 0.666
MDP0000736994 Malus domestica MDP0000736994 I 0.666
Lus10027369.g Linum usitatissimum Lus10027369.g I 0.665
Lus10031281.g Linum usitatissimum Lus10031281.g I 0.664
cassava5203.m1 Manihot esculenta cassava5203.m1 I 0.662
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.662