OBART02G05200 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART02G05200 T275456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT2G38300
M07056_2.00
Arabidopsis thaliana
WAHATTCYHTH

DADRGAATDTW
Dap-seq
OMalley et al.(2016)
AT2G38300_col_a
0.687 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G05200.1 Myb 1 51

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT2G38300 Arabidopsis thaliana AT2G38300 D 0.687
Cucsa.130050 Cucumis sativus Cucsa.130050 I 0.705
estExt_fgenesh1_pg.C_1660037 Physcomitrella patens estExt_fgenesh1_pg.C_1660037 I 0.672
mgf019744m Mimulus guttatus mgf019744m I 0.673
mgf023762m Mimulus guttatus mgf023762m I 0.759
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.673
Aquca_004_00431 Aquilegia coerulea Aquca_004_00431 I 0.680
Bostr.23794s0245 Boechera stricta Bostr.23794s0245 I 0.687
Cagra.4190s0017 Capsella grandiflora Cagra.4190s0017 I 0.687
Carubv10023575m.g Capsella rubella Carubv10023575m.g I 0.687
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.691
Ciclev10018145m.g Citrus clementina Ciclev10018145m.g I 0.713
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I 0.674
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.679
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.673
Eucgr.J01904 Eucalyptus grandis Eucgr.J01904 I 0.699
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.673
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.677
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I 0.671
Traes_7AL_9A1395EC7 Triticum aestivum Traes_7AL_9A1395EC7 I 0.747
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.673
TRIUR3_34172 Triticum urartu TRIUR3_34172 I 0.747
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.676
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.673
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.691
Ca_00645 Cicer arietinum Ca_00645 I 0.713
Ca_09400 Cicer arietinum Ca_09400 I 0.699
Cla017202 Citrullus lanatus Cla017202 I 0.673
Cla018361 Citrullus lanatus Cla018361 I 0.703
Pm002861 Prunus mume Pm002861 I 0.699
Pm010236 Prunus mume Pm010236 I 0.675
29780.m001368 Ricinus communis 29780.m001368 I 0.673
29842.m003572 Ricinus communis 29842.m003572 I 0.677
Eucgr.K02966 Eucalyptus grandis Eucgr.K02966 I 0.677
EuGene.0700010469 Micromonas sp RCC299 EuGene.0700010469 I 0.687
evm.TU.supercontig_120.33 Carica papaya evm.TU.supercontig_120.33 I 0.687
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.679
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I 0.674
Pavir.J33581 Panicum virgatum Pavir.J33581 I 0.780
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.691
SapurV1A.0042s0270 Salix purpurea SapurV1A.0042s0270 I 0.672
SapurV1A.0106s0010 Salix purpurea SapurV1A.0106s0010 I 0.681
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.673
SapurV1A.0566s0220 Salix purpurea SapurV1A.0566s0220 I 0.681
Thhalv10016890m.g Eutrema salsugineum Thhalv10016890m.g I 0.687
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.679
PK15677.1 Cannabis sativa PK15677.1 I 0.705
PK23854.1 Cannabis sativa PK23854.1 I 0.673
PK26966.1 Cannabis sativa PK26966.1 I 0.696
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.679
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.691
MDP0000321302 Malus domestica MDP0000321302 I 0.667
MDP0000272003 Malus domestica MDP0000272003 I 0.697
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.673
gene13487-v1.0-hybrid Fragaria vesca gene13487-v1.0-hybrid I 0.705
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I 0.688
gene21014-v1.0-hybrid Fragaria vesca gene21014-v1.0-hybrid I 0.699
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.673
Gorai.002G265400 Gossypium raimondii Gorai.002G265400 I 0.705
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.689
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.677
Gorai.012G117800 Gossypium raimondii Gorai.012G117800 I 0.687
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.677
MDP0000133017 Malus domestica MDP0000133017 I 0.698
MDP0000196504 Malus domestica MDP0000196504 I 0.689
MDP0000214282 Malus domestica MDP0000214282 I 0.689
MDP0000234120 Malus domestica MDP0000234120 I 0.685
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.697
BGIOSGA007064 Oryza indica BGIOSGA007064 I 0.888
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.673
GSMUA_Achr7G03510_001 Musa acuminata GSMUA_Achr7G03510_001 I 0.729
GSMUA_Achr9G30700_001 Musa acuminata GSMUA_Achr9G30700_001 I 0.704
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.671
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.705
MTR_7g069660 Medicago truncatula MTR_7g069660 I 0.699
OGLUM02G05030 Oryza glumaepatula OGLUM02G05030 I 0.881
fgenesh2_kg.4__1901__AT2G38300.1 Arabidopsis lyrata fgenesh2_kg.4__1901__AT2G38300.1 I 0.687
OMERI02G06020 Oryza meridionalis OMERI02G06020 I 0.759
ONIVA02G05430 Oryza nivara ONIVA02G05430 I 0.888
OPUNC02G04370 Oryza punctata OPUNC02G04370 I 0.888
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.673
OLONG_019167 Oryza longistaminata OLONG_019167 I 0.880
Bo4g029640 Brassica oleracea Bo4g029640 I 0.687
Bra005124 Brassica rapa Bra005124 I 0.687
F775_03870 Aegilops tauschii F775_03870 I 0.747
F775_04777 Aegilops tauschii F775_04777 I 0.747
F775_22605 Aegilops tauschii F775_22605 I 0.708
GLYMA01G31044 Glycine max GLYMA01G31044 I 0.698
GLYMA03G06620 Glycine max GLYMA03G06620 I 0.680
GLYMA07G18870 Glycine max GLYMA07G18870 I 0.699
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.713
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.713
GLYMA18G43550 Glycine max GLYMA18G43550 I 0.705
ORGLA02G0047700 Oryza glaberrima ORGLA02G0047700 I 0.888
ORUFI02G05300 Oryza rufipogon ORUFI02G05300 I 0.888
TCM_011166 Theobroma cacao TCM_011166 I 0.673
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.665
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.677
PRUPE_ppa021179mg Prunus persica PRUPE_ppa021179mg I 0.699
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.693
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.693
Si039234m.g Setaria italica Si039234m.g I 0.780
Solyc02g080720.1 Solanum lycopersicum Solyc02g080720.1 I 0.698
Solyc02g080730.1 Solanum lycopersicum Solyc02g080730.1 I 0.688
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.713
Solyc06g051060.2 Solanum lycopersicum Solyc06g051060.2 I 0.687
Solyc09g005030.1 Solanum lycopersicum Solyc09g005030.1 I 0.680
Solyc10g076460.1 Solanum lycopersicum Solyc10g076460.1 I 0.721
POPTR_0008s14140 Populus trichocarpa POPTR_0008s14140 I 0.684
TCM_021628 Theobroma cacao TCM_021628 I 0.699
PGSC0003DMG400015893 Solanum tuberosum PGSC0003DMG400015893 I 0.678
OS02G0168200 Oryza sativa OS02G0168200 I 0.888
PGSC0003DMG400026644 Solanum tuberosum PGSC0003DMG400026644 I 0.680
PGSC0003DMG400030032 Solanum tuberosum PGSC0003DMG400030032 I 0.687
Traes_7AL_BF6FD97DA Triticum aestivum Traes_7AL_BF6FD97DA N 0.727
ONIVA06G30620 Oryza nivara ONIVA06G30620 N 0.733
GRMZM2G100709 Zea mays GRMZM2G100709 N 0.692
OPUNC06G22010 Oryza punctata OPUNC06G22010 N 0.733
TRIUR3_18893 Triticum urartu TRIUR3_18893 N 0.694
Traes_7DL_FEA7D3672 Triticum aestivum Traes_7DL_FEA7D3672 N 0.727
OS06G0670300 Oryza sativa OS06G0670300 N 0.728
BRADI1G32370 Brachypodium distachyon BRADI1G32370 N 0.694
ORUFI06G26110 Oryza rufipogon ORUFI06G26110 N 0.733
ORGLA06G0204400 Oryza glaberrima ORGLA06G0204400 N 0.733
BGIOSGA023442 Oryza indica BGIOSGA023442 N 0.728
Pavir.Db00422 Panicum virgatum Pavir.Db00422 N 0.733
Pavir.Da00200 Panicum virgatum Pavir.Da00200 N 0.733
OB06G32040 Oryza brachyantha OB06G32040 N 0.782
MLOC_67085 Hordeum vulgare MLOC_67085 N 0.727
OBART06G24290 Oryza barthii OBART06G24290 N 0.733
MLOC_53958 Hordeum vulgare MLOC_53958 N 0.725
MLOC_53840 Hordeum vulgare MLOC_53840 N 0.727
LPERR06G20200 Leersia perrieri LPERR06G20200 N 0.733
OGLUM06G25550 Oryza glumaepatula OGLUM06G25550 N 0.733
Sb10g026930 Sorghum bicolor Sb10g026930 N 0.733
GRMZM2G454449 Zea mays GRMZM2G454449 N 0.733
OLONG_026929 Oryza longistaminata OLONG_026929 N 0.733
Si007179m.g Setaria italica Si007179m.g N 0.733
OMERI06G24530 Oryza meridionalis OMERI06G24530 N 0.733
F775_02595 Aegilops tauschii F775_02595 N 0.727