OBART03G02370 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART03G02370 T275479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.727 0.809
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.706 0.745
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.706 0.745
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.695 0.787
PHR1
M02329_2.00
Oryza sativa
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7755
0.691 0.745
PHL6
M02295_2.00
Arabidopsis thaliana
NNWKATNCBN

NVGNATMWNN
PBM
Weirauch et al.(2014)
pTH7071
0.681 0.681
PHL6
M07083_2.00
Arabidopsis thaliana
NDGAAAACH

DGTTTTCHN
Dap-seq
OMalley et al.(2016)
At3g13040_col_b
0.681 0.681
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G02370.1 Myb 22 73

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

481 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.000
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.000
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.000
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.000
Bostr.15774s0334 Boechera stricta Bostr.15774s0334 I 0.000
F775_04223 Aegilops tauschii F775_04223 I 0.000
F775_43210 Aegilops tauschii F775_43210 I 0.000
GRMZM2G472096 Zea mays GRMZM2G472096 N 0.000
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.000
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.000
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.000
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.000
OBART01G45740 Oryza barthii OBART01G45740 N 0.000
OBART09G00850 Oryza barthii OBART09G00850 N 0.000
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.000
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.000
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.000
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.000
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.000
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.000
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.000
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.000
OPUNC06G14730 Oryza punctata OPUNC06G14730 N 0.000
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.000
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.000
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.000
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.000
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.000
OS01G0975800 Oryza sativa OS01G0975800 N 0.000
OS09G0116800 Oryza sativa OS09G0116800 N 0.000
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.000
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.000
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.000
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.000
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.000
Sb02g006700 Sorghum bicolor Sb02g006700 N 0.000
Sb02g006710 Sorghum bicolor Sb02g006710 N 0.000
Sb02g006730 Sorghum bicolor Sb02g006730 N 0.000
Sb02g006750 Sorghum bicolor Sb02g006750 N 0.000
Sb0836s002010 Sorghum bicolor Sb0836s002010 N 0.000
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.000
Si019951m.g Setaria italica Si019951m.g I 0.000
Si032189m.g Setaria italica Si032189m.g N 0.000
Si038960m.g Setaria italica Si038960m.g N 0.000
Thhalv10015303m.g Eutrema salsugineum Thhalv10015303m.g I 0.000
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.000
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.000
TRIUR3_21732 Triticum urartu TRIUR3_21732 I 0.000