OGLUM03G21860 (Oryza glumaepatula)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OGLUM03G21860 T275699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.668 0.739
GRMZM2G005066
M11056_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.665 0.696
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.662 0.745
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.661 0.713
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM03G21860.1 Myb 14 61
OGLUM03G21860.1 Myb 67 114
OGLUM03G21860.2 Myb 14 61
OGLUM03G21860.2 Myb 67 123

Links

Other Myb/SANT family TFs
Other Oryza glumaepatula TFs

Invalid Input OrderBy

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action