OLONG_002370 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_002370 T275863_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.813 0.915
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.813 0.915
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.802 0.894
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.742 0.830
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.737 0.894
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.735 0.894
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.728 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_002370-R1 Myb 204 254

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

460 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASTEI01331 Anopheles stephensi ASTEI01331 I 0.000
ACHR000726 Anopheles christyi ACHR000726 I 0.000
AATE016159 Anopheles atroparvus AATE016159 I 0.000
AARA007990 Anopheles arabiensis AARA007990 I 0.000
AALB004535 Anopheles albimanus AALB004535 I 0.000
LDEC000161 Leptinotarsa decemlineata LDEC000161 I 0.000
CLEC007231 Cimex lectularius CLEC007231 I 0.000
fgenesh2_pg.scaffold_208000070 Branchiostoma floridae fgenesh2_pg.scaffold_208000070 I 0.000
estExt_fgenesh2_pg.C_2670023 Branchiostoma floridae estExt_fgenesh2_pg.C_2670023 I 0.000
ACOM025626 Anopheles coluzzii ACOM025626 I 0.000
ACUA028400 Anopheles culicifacies ACUA028400 I 0.000
AQUA004503 Anopheles quadriannulatus AQUA004503 I 0.000
AMIN010496 Anopheles minimus AMIN010496 I 0.000
AMEM003440 Anopheles merus AMEM003440 I 0.000
AMEC004928 Anopheles melas AMEC004928 I 0.000
AMAM001825 Anopheles maculatus AMAM001825 I 0.000
AFUN002061 Anopheles funestus AFUN002061 I 0.000
AFAF018449 Anopheles farauti AFAF018449 I 0.000
AEPI009248 Anopheles epiroticus AEPI009248 I 0.000
Hsal_09569--XP_001121566.1_APIME Harpegnathos saltator Hsal_09569--XP_001121566.1_APIME I 0.000
Cflo_01621--XP_001121566.1_APIME Camponotus floridanus Cflo_01621--XP_001121566.1_APIME I 0.000
YQE_10237 Dendroctonus ponderosae YQE_10237 I 0.000
CPIJ010764 Culex quinquefasciatus CPIJ010764 I 0.000
CGI_10012001 Crassostrea gigas CGI_10012001 I 0.000
Aqu1.224085 Amphimedon queenslandica Aqu1.224085 I 0.000
AGAP007376 Anopheles gambiae AGAP007376 I 0.000
ADAC005077 Anopheles darlingi ADAC005077 I 0.000
ACYPI48827 Acyrthosiphon pisum ACYPI48827 I 0.000
ACEP21720 Atta cephalotes ACEP21720 I 0.000
CpipJ_CPIJ017497 Culex pipiens CpipJ_CPIJ017497 I 0.000
CPIJ017497 Culex quinquefasciatus CPIJ017497 I 0.000
ENSEEUG00000006487 Erinaceus europaeus ENSEEUG00000006487 I 0.000
TC007453 Tribolium castaneum TC007453 I 0.000
SINV17788 Solenopsis invicta SINV17788 I 0.000
PHUM011400 Pediculus humanus PHUM011400 I 0.000
NV16776 Nasonia vitripennis NV16776 I 0.000
KGM_14733 Danaus plexippus KGM_14733 I 0.000
GB50732 Apis mellifera GB50732 I 0.000
NFYA Microcebus murinus ENSMICG00000009686 I 0.000
ENSMEUG00000005917 Macropus eugenii ENSMEUG00000005917 I 0.000
CpipJ_CPIJ010764 Culex pipiens CpipJ_CPIJ010764 I 0.000