OLONG_003720 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_003720 T275872_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NIGT1
M02328_2.00
Oryza sativa
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH8646
0.821 0.872
HHO3
M02289_2.00
Arabidopsis thaliana
NWGATWCBNN

NNVGWATCWN
PBM
Weirauch et al.(2014)
pTH7278
0.813 0.872
HHO2
M02290_2.00
Arabidopsis thaliana
NNKATHCNNN

NNNGDATMNN
PBM
Weirauch et al.(2014)
pTH7115
0.813 0.872
HHO3
M07016_2.00
Arabidopsis thaliana
NNDHNNAAKATTCY

RGAATMTTNNDHNN
Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a
0.813 0.872
HHO3
M07017_2.00
Arabidopsis thaliana
HNNAAKATTCY

RGAATMTTNND
Dap-seq
OMalley et al.(2016)
At1g25550_col
0.813 0.872
HHO2
M07029_2.00
Arabidopsis thaliana
AKATTCY

RGAATMT
Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a
0.813 0.872
HHO2
M07030_2.00
Arabidopsis thaliana
RDATYNNAGATTC

GAATCTNNRATHY
Dap-seq
OMalley et al.(2016)
At1g68670_col
0.813 0.872
HHO6
M07024_2.00
Arabidopsis thaliana
GAATCTNNDAT

ATHNNAGATTC
Dap-seq
OMalley et al.(2016)
AT1G49560_col_a
0.803 0.894
HHO6
M07025_2.00
Arabidopsis thaliana
DGAATCTHNGATHCN

NGDATCNDAGATTCH
Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a
0.803 0.894
PK19779.1
M02354_2.00
Cannabis sativa
NNKATNCNNN

NNNGNATMNN
PBM
Weirauch et al.(2014)
pTH9610
0.772 0.851
EFM
M07044_2.00
Arabidopsis thaliana
NNGAATATTCY

RGAATATTCNN
Dap-seq
OMalley et al.(2016)
At2g03500_col_a
0.767 0.872
EFM
M07045_2.00
Arabidopsis thaliana
RGAATCHWAGATTC

GAATCTWDGATTCY
Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a
0.767 0.872
HRS1
M02284_2.00
Arabidopsis thaliana
AGATTCYN

NRGAATCT
PBM
Weirauch et al.(2014)
pTH7118
0.742 0.851
HRS1
M01068_2.00
Arabidopsis thaliana
NAGATTCBNN

NNVGAATCTN
PBM
Sullivan et al.(2014)
pTH7648
0.742 0.851
HRS1
M07004_2.00
Arabidopsis thaliana
NDDWWVNAAKATTCY

RGAATMTTNBWWHHN
Dap-seq
OMalley et al.(2016)
At1g13300_col_a
0.742 0.851
PK14402.1
M02352_2.00
Cannabis sativa
NDWGATTCSNN

NNSGAATCWHN
PBM
Weirauch et al.(2014)
pTH9491
0.732 0.830
HHO5
M07112_2.00
Arabidopsis thaliana
HNDAAGATTCH

DGAATCTTHND
Dap-seq
OMalley et al.(2016)
AT4G37180_col_a
0.709 0.830
HHO5
M07113_2.00
Arabidopsis thaliana
NNDAAGATTCY

RGAATCTTHNN
Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a
0.709 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_003720-R1 Myb 201 252

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

361 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
1127_YBL066C Saccharomyces bayanus 1127_YBL066C N 0.000
1560_Multiple Saccharomyces mikatae 1560_Multiple N 0.000
593_YBL066C Saccharomyces paradoxus 593_YBL066C N 0.000
AACERI_AaceriAGR369W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR369W N 0.000
AGOS_AGR369W Ashbya gossypii AGOS_AGR369W N 0.000
BN7_4777 Wickerhamomyces ciferrii BN7_4777 N 0.000
CAGL0A04455g Candida glabrata CAGL0A04455g N 0.000
CANTEDRAFT_137002 Candida tenuis CANTEDRAFT_137002 N 0.000
CORT_0A01490 Candida orthopsilosis CORT_0A01490 N 0.000
CPAG_04485 Candida parapsilosis CPAG_04485 N 0.000
DEHA2C16676g Debaryomyces hansenii DEHA2C16676g N 0.000
Ecym_4686 Eremothecium cymbalariae Ecym_4686 N 0.000
estExt_gwp_genewisePlus_worm.C_chr_3.10726 Pichia stipitis estExt_gwp_genewisePlus_worm.C_chr_3.10726 N 0.000
GNLVRS01_PISO0K22054g Millerozyma farinosa GNLVRS01_PISO0K22054g N 0.000
GNLVRS01_PISO0L22055g Millerozyma farinosa GNLVRS01_PISO0L22055g N 0.000
HPODL_03022 Ogataea parapolymorpha HPODL_03022 N 0.000
JL09_g740 Pichia kudriavzevii JL09_g740 N 0.000
KLLA0_E20307g Kluyveromyces lactis KLLA0_E20307g N 0.000
KLTH0C06776g Kluyveromyces thermotolerans KLTH0C06776g N 0.000
KLTH0C06776g Lachancea thermotolerans KLTH0C06776g N 0.000
Kpol_1018p92 Vanderwaltozyma polyspora Kpol_1018p92 N 0.000
KUCA_T00001887001 Kuraishia capsulata KUCA_T00001887001 N 0.000
Kwal_10852 Kluyveromyces waltii Kwal_10852 N 0.000
LALA0_S01e06766g Lachancea lanzarotensis LALA0_S01e06766g N 0.000
LELG_00073 Lodderomyces elongisporus LELG_00073 N 0.000
PAS_chr3_0905 Komagataella pastoris PAS_chr3_0905 N 0.000
PGUG_03868 Candida guilliermondii PGUG_03868 N 0.000
PGUG_03868 Meyerozyma guilliermondii PGUG_03868 N 0.000
PICST_82707 Scheffersomyces stipitis PICST_82707 N 0.000
SAKL0F12342g Lachancea kluyveri SAKL0F12342g N 0.000
SKUD_188909 Saccharomyces kudriavzevii SKUD_188909 N 0.000
SPAPADRAFT_149277 Spathaspora passalidarum SPAPADRAFT_149277 N 0.000
SU7_0079 Saccharomyces arboricola SU7_0079 N 0.000
TBLA_0D00630 Tetrapisispora blattae TBLA_0D00630 N 0.000
TDEL_0C01580 Torulaspora delbrueckii TDEL_0C01580 N 0.000
XP_002493143.1 Pichia pastoris XP_002493143.1 N 0.000
SEF1 Saccharomyces cerevisiae YBL066C N 0.000
ZBAI_06026 Zygosaccharomyces bailii ZBAI_06026 N 0.000
ZYRO0B03278g Zygosaccharomyces rouxii ZYRO0B03278g N 0.000