OLONG_007266 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_007266 T275896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.743 0.809
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.717 0.809
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.709 0.872
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.679 0.745
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.679 0.745
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN

NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.677 0.809
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.675 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_007266-R1 Myb 132 182

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

326 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo6g103870 Brassica oleracea Bo6g103870 N 0.000
Bra004229 Brassica rapa Bra004229 N 0.000
Cagra.9801s0004 Capsella grandiflora Cagra.9801s0004 N 0.000
cassava14758.m1 Manihot esculenta cassava14758.m1 N 0.000
Ca_04428 Cicer arietinum Ca_04428 N 0.000
Ca_09421 Cicer arietinum Ca_09421 N 0.000
chr1.LjT01D01.120.nd Lotus japonicus chr1.LjT01D01.120.nd N 0.000
chr3.CM0116.60.nd Lotus japonicus chr3.CM0116.60.nd N 0.000
Ciclev10030842m.g Citrus clementina Ciclev10030842m.g N 0.000
Eucgr.H04654 Eucalyptus grandis Eucgr.H04654 N 0.000
evm.TU.supercontig_43.22 Carica papaya evm.TU.supercontig_43.22 N 0.000
GLYMA03G06320 Glycine max GLYMA03G06320 N 0.000
MDP0000305994 Malus domestica MDP0000305994 N 0.000
mgf019748m Mimulus guttatus mgf019748m N 0.000
MTR_7g070200 Medicago truncatula MTR_7g070200 N 0.000
orange1.1g005226m.g Citrus sinensis orange1.1g005226m.g N 0.000
PGSC0003DMG400014917 Solanum tuberosum PGSC0003DMG400014917 N 0.000
POPTR_0010s06830 Populus trichocarpa POPTR_0010s06830 N 0.000
PRUPE_ppa002123mg Prunus persica PRUPE_ppa002123mg N 0.000
TCM_010797 Theobroma cacao TCM_010797 N 0.000
Thhalv10018190m.g Eutrema salsugineum Thhalv10018190m.g N 0.000
VIT_01s0010g02910 Vitis vinifera VIT_01s0010g02910 N 0.000