OMERI06G04840 (Oryza meridionalis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OMERI06G04840 T276114_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB98
M02301_2.00
Arabidopsis thaliana
NNGTAACGKMN

NKMCGTTACNN
PBM
Weirauch et al.(2014)
pTH8148
0.785 0.849
MYB98
M07108_2.00
Arabidopsis thaliana
DWWWHGTAACGKWHD

HDWMCGTTACDWWWH
Dap-seq
OMalley et al.(2016)
MYB98_col_a
0.785 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI06G04840.1 Myb 142 188
OMERI06G04840.1 Myb 194 239

Links

Other Myb/SANT family TFs
Other Oryza meridionalis TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AC232321.1_FG008 Zea mays AC232321.1_FG008 N 0.000
BGIOSGA021810 Oryza indica BGIOSGA021810 N 0.000
BGIOSGA021811 Oryza indica BGIOSGA021811 N 0.000
BGIOSGA021812 Oryza indica BGIOSGA021812 N 0.000
BGIOSGA021814 Oryza indica BGIOSGA021814 N 0.000
F775_03070 Aegilops tauschii F775_03070 I 0.000
F775_23221 Aegilops tauschii F775_23221 N 0.000
F775_23301 Aegilops tauschii F775_23301 N 0.000
F775_23426 Aegilops tauschii F775_23426 N 0.000
GRMZM2G111306 Zea mays GRMZM2G111306 I 0.000
GRMZM2G121111 Zea mays GRMZM2G121111 I 0.000
OB06G14500 Oryza brachyantha OB06G14500 N 0.000
OGLUM06G05040 Oryza glumaepatula OGLUM06G05040 N 0.000
ONIVA06G15060 Oryza nivara ONIVA06G15060 N 0.000
ONIVA06G15070 Oryza nivara ONIVA06G15070 N 0.000
OPUNC06G04640 Oryza punctata OPUNC06G04640 I 0.000
ORGLA06G0044500 Oryza glaberrima ORGLA06G0044500 N 0.000
ORGLA06G0044900 Oryza glaberrima ORGLA06G0044900 N 0.000
ORUFI06G04920 Oryza rufipogon ORUFI06G04920 N 0.000
Pavir.Ca01208 Panicum virgatum Pavir.Ca01208 N 0.000
Pavir.Ca01211 Panicum virgatum Pavir.Ca01211 N 0.000
Pavir.Ca01212 Panicum virgatum Pavir.Ca01212 N 0.000
Pavir.Ga00772 Panicum virgatum Pavir.Ga00772 N 0.000
Pavir.J00200 Panicum virgatum Pavir.J00200 N 0.000
Pavir.J00203 Panicum virgatum Pavir.J00203 N 0.000
Pavir.J01189 Panicum virgatum Pavir.J01189 I 0.000
Q8RUX5_MAIZE Zea mays Q8RUX5_MAIZE D 0.000
Sb01g029290 Sorghum bicolor Sb01g029290 N 0.000
Sb09g003290 Sorghum bicolor Sb09g003290 N 0.000
Sb09g003300 Sorghum bicolor Sb09g003300 N 0.000
Sb09g003390 Sorghum bicolor Sb09g003390 I 0.000
Sb10g007420 Sorghum bicolor Sb10g007420 N 0.000
Sb10g009650 Sorghum bicolor Sb10g009650 N 0.000
Si007873m.g Setaria italica Si007873m.g N 0.000
Si007889m.g Setaria italica Si007889m.g I 0.000
Si015542m.g Setaria italica Si015542m.g N 0.000
Si023710m.g Setaria italica Si023710m.g N 0.000
Si025176m.g Setaria italica Si025176m.g I 0.000
Si032375m.g Setaria italica Si032375m.g N 0.000
Si032599m.g Setaria italica Si032599m.g I 0.000
Traes_1AL_FF8F7A939 Triticum aestivum Traes_1AL_FF8F7A939 N 0.000
TRIUR3_31433 Triticum urartu TRIUR3_31433 N 0.000
TRIUR3_33433 Triticum urartu TRIUR3_33433 N 0.000